DRSC/TRiP Functional Genomics Resources

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Protein Alignment cathD and AT4G04985

DIOPT Version :10

Sequence 1:NP_652013.1 Gene:cathD / 45268 FlyBaseID:FBgn0029093 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_680599.1 Gene:AT4G04985 / 825840 AraportID:AT4G04985 Length:158 Species:Arabidopsis thaliana


Alignment Length:20 Identity:7/20 - (35%)
Similarity:11/20 - (55%) Gaps:3/20 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 VPEPLSNYMDAQ---YYGPI 77
            :.|.|:|:.|.|   |.|.:
plant    58 IDEKLNNFSDGQLECYNGTV 77

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cathDNP_652013.1 A1_Propeptide 29..56 CDD:462326
pepsin_retropepsin_like 62..389 CDD:472175 7/19 (37%)
AT4G04985NP_680599.1 TAXi_C 5..149 CDD:434029 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.

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