DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cathD and PGA3

DIOPT Version :9

Sequence 1:NP_001334713.1 Gene:cathD / 45268 FlyBaseID:FBgn0029093 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_001073275.1 Gene:PGA3 / 643834 HGNCID:8885 Length:388 Species:Homo sapiens


Alignment Length:377 Identity:156/377 - (41%)
Similarity:217/377 - (57%) Gaps:22/377 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LLRVPLHKFQSARRHFADVGT--------ELQQLRIRYGGGDVP-----EPLSNYMDAQYYGPIA 78
            :.:|||.:.:|.||..::.|.        .|...|..:.....|     :||.||:|.:|:|.|.
Human    17 MYKVPLIRKKSLRRTLSERGLLKDFLKKHNLNPARKYFPQWKAPTLVDEQPLENYLDMEYFGTIG 81

  Fly    79 IGSPPQNFRVVFDTGSSNLWVPSKKCHLTNIACLMHNKYDASKSKTYTKNGTEFAIQYGSGSLSG 143
            ||:|.|:|.||||||||||||||..|  :::||..||:::...|.||.......:|.||:||::|
Human    82 IGTPAQDFTVVFDTGSSNLWVPSVYC--SSLACTNHNRFNPEDSSTYQSTSETVSITYGTGSMTG 144

  Fly   144 YLSTDTVSIAGLDIKDQTFAEALSEPGLVFVAAKFDGILGLGYNSISVDKVKPPFYAMYEQGLIS 208
            .|..|||.:.|:...:|.|..:.:|||.....|.|||||||.|.|||.....|.|..::.|||:|
Human   145 ILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISSSGATPVFDNIWNQGLVS 209

  Fly   209 APVFSFYLNRDPASPEGGEIIFGGSDPNHYTGEFTYLPVTRKAYWQIKMDAASI-GDLQLCKGGC 272
            ..:||.||:.|..|  |..:||||.|.::|||...::|||.:.||||.:|:.:: |:...|..||
Human   210 QDLFSVYLSADDQS--GSVVIFGGIDSSYYTGSLNWVPVTVEGYWQITVDSITMNGEAIACAEGC 272

  Fly   273 QVIADTGTSLIAAPLEEATSINQKIGGTPIIGGQYVVSCDLIPQLPVIKFVLGGKTFELEGKDYI 337
            |.|.||||||:..|.....:|...||.:....|..||||..|..||.|.|.:.|..:.:....||
Human   273 QAIVDTGTSLLTGPTSPIANIQSDIGASENSDGDMVVSCSAISSLPDIVFTINGVQYPVPPSAYI 337

  Fly   338 LRVAQMGKTICLSGFMGLDIPPPNGPLWILGDVFIGKYYTEFDMGNDRVGFA 389
            |:    .:..|:|||.|:::|..:|.|||||||||.:|:|.||..|::||.|
Human   338 LQ----SEGSCISGFQGMNLPTESGELWILGDVFIRQYFTVFDRANNQVGLA 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cathDNP_001334713.1 None
PGA3NP_001073275.1 A1_Propeptide 17..45 CDD:285240 7/27 (26%)
pepsin_A 66..386 CDD:133145 146/328 (45%)
Asp 75..387 CDD:278455 141/319 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.930

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