DRSC/TRiP Functional Genomics Resources

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Protein Alignment cathD and napsa

DIOPT Version :10

Sequence 1:NP_652013.1 Gene:cathD / 45268 FlyBaseID:FBgn0029093 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_001005701.1 Gene:napsa / 448214 XenbaseID:XB-GENE-947098 Length:402 Species:Xenopus tropicalis


Alignment Length:375 Identity:214/375 - (57%)
Similarity:269/375 - (71%) Gaps:14/375 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LLRVPLHKFQSARRHFADVGTELQQLRIRYGGG--------DVPEPLSNYMDAQYYGPIAIGSPP 83
            |:|:||.||.|.||..:|..|:.:     :.|.        .:||.|:||:||||||.|.||:||
 Frog    18 LIRIPLKKFPSIRRTLSDSMTKEE-----FNGATKEFLKQQTIPEKLTNYLDAQYYGEIFIGTPP 77

  Fly    84 QNFRVVFDTGSSNLWVPSKKCHLTNIACLMHNKYDASKSKTYTKNGTEFAIQYGSGSLSGYLSTD 148
            |.|.|:||||||||||||.||...:.||.:|.||.:..|.||.:|.||||||||:|||||:||.|
 Frog    78 QKFAVIFDTGSSNLWVPSIKCSFFDFACWLHKKYRSKDSSTYQQNNTEFAIQYGTGSLSGFLSQD 142

  Fly   149 TVSIAGLDIKDQTFAEALSEPGLVFVAAKFDGILGLGYNSISVDKVKPPFYAMYEQGLISAPVFS 213
            ||::..:|:.:||||||:.:||:|||.|.||||||:||.:||||.|.|.|..|.||.|:...|||
 Frog   143 TVTVGSIDVANQTFAEAVKQPGIVFVFAHFDGILGMGYPNISVDGVVPVFDNMMEQKLLEENVFS 207

  Fly   214 FYLNRDPASPEGGEIIFGGSDPNHYTGEFTYLPVTRKAYWQIKMDAASIGD-LQLCKGGCQVIAD 277
            |||:|||.:..|||::.||:|||:|||:|.||.|||.||||||.|...:.: |.|||||||.|.|
 Frog   208 FYLSRDPMAMVGGELVLGGTDPNYYTGDFHYLNVTRMAYWQIKADEVRVANQLVLCKGGCQAIVD 272

  Fly   278 TGTSLIAAPLEEATSINQKIGGTPIIGGQYVVSCDLIPQLPVIKFVLGGKTFELEGKDYILRVAQ 342
            ||||||..|.||..::::.||..|:..|:|.|:|..|..||.:.|:|||..:.|.|:.|:|::::
 Frog   273 TGTSLITGPREEIRALHKAIGAFPLFSGEYFVNCKRIQSLPTVSFILGGVAYNLTGEQYVLKISK 337

  Fly   343 MGKTICLSGFMGLDIPPPNGPLWILGDVFIGKYYTEFDMGNDRVGFADAK 392
            .|.|:||||||||||.||.||||||||||||:|||.||..|||||||.||
 Frog   338 FGHTLCLSGFMGLDIRPPAGPLWILGDVFIGQYYTVFDRDNDRVGFATAK 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cathDNP_652013.1 A1_Propeptide 29..56 CDD:462326 10/26 (38%)
pepsin_retropepsin_like 62..389 CDD:472175 198/327 (61%)
napsaNP_001005701.1 A1_Propeptide 20..42 CDD:462326 10/26 (38%)
pepsin_retropepsin_like 61..384 CDD:472175 195/322 (61%)

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