DRSC/TRiP Functional Genomics Resources

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Protein Alignment cathD and asp-4

DIOPT Version :10

Sequence 1:NP_652013.1 Gene:cathD / 45268 FlyBaseID:FBgn0029093 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_510191.1 Gene:asp-4 / 181444 WormBaseID:WBGene00000217 Length:444 Species:Caenorhabditis elegans


Alignment Length:410 Identity:204/410 - (49%)
Similarity:270/410 - (65%) Gaps:22/410 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VALLLVAFLAAAVAHPNSQEKPGLLRVPLHKFQSARRHFADVGTELQQLRIRYG----------- 57
            :.|||.|.|.....|.:.:::. |..|.|.|..:.|......|:.....:.|:|           
 Worm     5 ILLLLGALLLVQGLHVHKRQQK-LRTVSLKKQPTLRETLLQAGSFETFAKHRHGYKKYLKTNGNH 68

  Fly    58 ----------GGDVPEPLSNYMDAQYYGPIAIGSPPQNFRVVFDTGSSNLWVPSKKCHLTNIACL 112
                      .|::.|.|.|||||||:|.|:||:|.|||.|:|||||||||:|||||...:|||:
 Worm    69 HFDKYQALNVEGEIDELLRNYMDAQYFGTISIGTPAQNFTVIFDTGSSNLWIPSKKCPFYDIACM 133

  Fly   113 MHNKYDASKSKTYTKNGTEFAIQYGSGSLSGYLSTDTVSIAGLDIKDQTFAEALSEPGLVFVAAK 177
            :|::||:..|.||.::|.:.|||||:||:.|::|.|:|.:||:..:||.||||.||||:.|||||
 Worm   134 LHHRYDSKSSSTYKEDGRKMAIQYGTGSMKGFISKDSVCVAGVCAEDQPFAEATSEPGITFVAAK 198

  Fly   178 FDGILGLGYNSISVDKVKPPFYAMYEQGLISAPVFSFYLNRDPASPEGGEIIFGGSDPNHYTGEF 242
            ||||||:.|..|:|..|:|.|..::||..:.:.:|||:|||:|.|..||||.|||.|...|....
 Worm   199 FDGILGMAYPEIAVLGVQPVFNTLFEQKKVPSNLFSFWLNRNPDSEIGGEITFGGIDSRRYVEPI 263

  Fly   243 TYLPVTRKAYWQIKMDAASIGDLQLCKGGCQVIADTGTSLIAAPLEEATSINQKIGGTPIIGGQY 307
            ||:|||||.|||.|||......:..|..|||.||||||||||.|..:..:|...||..|:|.|:|
 Worm   264 TYVPVTRKGYWQFKMDKVVGSGVLGCSNGCQAIADTGTSLIAGPKAQIEAIQNFIGAEPLIKGEY 328

  Fly   308 VVSCDLIPQLPVIKFVLGGKTFELEGKDYILRVAQMGKTICLSGFMGLDIPPPNGPLWILGDVFI 372
            ::|||.:|.||.:.||:||:.|.|:|:||:|:|:|.|||||||||||:|:|...|.|||||||||
 Worm   329 MISCDKVPTLPPVSFVIGGQEFSLKGEDYVLKVSQGGKTICLSGFMGIDLPERVGELWILGDVFI 393

  Fly   373 GKYYTEFDMGNDRVGFADAK 392
            |:||:.||...:|||||.||
 Worm   394 GRYYSVFDFDQNRVGFAQAK 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cathDNP_652013.1 A1_Propeptide 29..56 CDD:462326 5/26 (19%)
pepsin_retropepsin_like 62..389 CDD:472175 185/326 (57%)
asp-4NP_510191.1 pepsin_retropepsin_like 88..411 CDD:472175 184/322 (57%)

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