DRSC/TRiP Functional Genomics Resources

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Protein Alignment cathD and asp-4

DIOPT Version :9

Sequence 1:NP_001334713.1 Gene:cathD / 45268 FlyBaseID:FBgn0029093 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_510191.1 Gene:asp-4 / 181444 WormBaseID:WBGene00000217 Length:444 Species:Caenorhabditis elegans


Alignment Length:410 Identity:204/410 - (49%)
Similarity:270/410 - (65%) Gaps:22/410 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VALLLVAFLAAAVAHPNSQEKPGLLRVPLHKFQSARRHFADVGTELQQLRIRYG----------- 57
            :.|||.|.|.....|.:.:::. |..|.|.|..:.|......|:.....:.|:|           
 Worm     5 ILLLLGALLLVQGLHVHKRQQK-LRTVSLKKQPTLRETLLQAGSFETFAKHRHGYKKYLKTNGNH 68

  Fly    58 ----------GGDVPEPLSNYMDAQYYGPIAIGSPPQNFRVVFDTGSSNLWVPSKKCHLTNIACL 112
                      .|::.|.|.|||||||:|.|:||:|.|||.|:|||||||||:|||||...:|||:
 Worm    69 HFDKYQALNVEGEIDELLRNYMDAQYFGTISIGTPAQNFTVIFDTGSSNLWIPSKKCPFYDIACM 133

  Fly   113 MHNKYDASKSKTYTKNGTEFAIQYGSGSLSGYLSTDTVSIAGLDIKDQTFAEALSEPGLVFVAAK 177
            :|::||:..|.||.::|.:.|||||:||:.|::|.|:|.:||:..:||.||||.||||:.|||||
 Worm   134 LHHRYDSKSSSTYKEDGRKMAIQYGTGSMKGFISKDSVCVAGVCAEDQPFAEATSEPGITFVAAK 198

  Fly   178 FDGILGLGYNSISVDKVKPPFYAMYEQGLISAPVFSFYLNRDPASPEGGEIIFGGSDPNHYTGEF 242
            ||||||:.|..|:|..|:|.|..::||..:.:.:|||:|||:|.|..||||.|||.|...|....
 Worm   199 FDGILGMAYPEIAVLGVQPVFNTLFEQKKVPSNLFSFWLNRNPDSEIGGEITFGGIDSRRYVEPI 263

  Fly   243 TYLPVTRKAYWQIKMDAASIGDLQLCKGGCQVIADTGTSLIAAPLEEATSINQKIGGTPIIGGQY 307
            ||:|||||.|||.|||......:..|..|||.||||||||||.|..:..:|...||..|:|.|:|
 Worm   264 TYVPVTRKGYWQFKMDKVVGSGVLGCSNGCQAIADTGTSLIAGPKAQIEAIQNFIGAEPLIKGEY 328

  Fly   308 VVSCDLIPQLPVIKFVLGGKTFELEGKDYILRVAQMGKTICLSGFMGLDIPPPNGPLWILGDVFI 372
            ::|||.:|.||.:.||:||:.|.|:|:||:|:|:|.|||||||||||:|:|...|.|||||||||
 Worm   329 MISCDKVPTLPPVSFVIGGQEFSLKGEDYVLKVSQGGKTICLSGFMGIDLPERVGELWILGDVFI 393

  Fly   373 GKYYTEFDMGNDRVGFADAK 392
            |:||:.||...:|||||.||
 Worm   394 GRYYSVFDFDQNRVGFAQAK 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cathDNP_001334713.1 None
asp-4NP_510191.1 pepsin_retropepsin_like 88..411 CDD:386101 184/322 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159213
Domainoid 1 1.000 388 1.000 Domainoid score I414
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55616
Inparanoid 1 1.050 408 1.000 Inparanoid score I1060
Isobase 1 0.950 - 0 Normalized mean entropy S917
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 1 1.000 - - otm14085
orthoMCL 1 0.900 - - OOG6_100536
Panther 1 1.100 - - LDO PTHR47966
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3883
SonicParanoid 1 1.000 - - X163
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1716.750

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