DRSC/TRiP Functional Genomics Resources

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Protein Alignment cathD and asp-3

DIOPT Version :9

Sequence 1:NP_001334713.1 Gene:cathD / 45268 FlyBaseID:FBgn0029093 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_509142.2 Gene:asp-3 / 180947 WormBaseID:WBGene00000216 Length:398 Species:Caenorhabditis elegans


Alignment Length:400 Identity:184/400 - (46%)
Similarity:245/400 - (61%) Gaps:25/400 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLVAFLAAAVAHPNSQEKPGLLRVPLHKFQSARRHFADVGTELQQLRIRYGGGDVP------EPL 65
            ||:|.:|.|.|         :.|:.|.|....|..: ..|:..:.|:.:|..|.:|      |.|
 Worm     7 LLLALVALASA---------IQRIKLEKRTYTREQY-KFGSIQEHLKAKYVPGYIPNKDAFNEGL 61

  Fly    66 SNYMDAQYYGPIAIGSPPQNFRVVFDTGSSNLWVPSKKCHLTNIACLMHNKYDASKSKTYTKNGT 130
            |:|.:||||||:.||:|||||:|:|||||||||||...|...:|||.|||::|..||.:.|..|.
 Worm    62 SDYSNAQYYGPVTIGTPPQNFQVLFDTGSSNLWVPCANCPFGDIACRMHNRFDCKKSSSCTATGA 126

  Fly   131 EFAIQYGSGSLSGYLSTDTVSIAGLDI-----KDQTFAEALSEPGLVFVAAKFDGILGLGYNSIS 190
            .|.||||:||:.|.:..|.|.. |.|.     |:|..|.|.||||:.|||||||||.|:|:::||
 Worm   127 SFEIQYGTGSMKGTVDNDVVCF-GHDTTYCTDKNQGLACATSEPGITFVAAKFDGIFGMGWDTIS 190

  Fly   191 VDKVKPPFYAMYEQGLI-SAPVFSFYLNRDPAS-PEGGEIIFGGSDPNHYTGEFTYLPVTRKAYW 253
            |:|:..|...::....| ...:|:|:|:||... ..||||....:|||||.|...:.|:..:.||
 Worm   191 VNKISQPMDQIFANSAICKNQLFAFWLSRDANDITNGGEITLCDTDPNHYVGNIAWEPLVSEDYW 255

  Fly   254 QIKMDAASIGDLQLCKGGCQVIADTGTSLIAAPLEEATSINQKIGGTPIIGGQYVVSCDLIPQLP 318
            :||:.:..|.......|....|.||||||:..|.:....|..||||.|:..|:|.|.|..||.||
 Worm   256 RIKLASVVIDGTTYTSGPIDSIVDTGTSLLTGPTDVIKKIQHKIGGIPLFNGEYEVECSKIPSLP 320

  Fly   319 VIKFVLGGKTFELEGKDYILRVAQ-MGKTICLSGFMGLDIPPPNGPLWILGDVFIGKYYTEFDMG 382
            .|.|.|||:.|:|:||||||:::. .|.:.|||||||:|||.|.||||||||||||::|:.||.|
 Worm   321 NITFNLGGQNFDLQGKDYILQMSNGNGGSTCLSGFMGMDIPAPAGPLWILGDVFIGRFYSVFDHG 385

  Fly   383 NDRVGFADAK 392
            |.|||||.::
 Worm   386 NKRVGFATSR 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cathDNP_001334713.1 None
asp-3NP_509142.2 pepsin_retropepsin_like 59..393 CDD:299705 168/334 (50%)
Asp 68..393 CDD:278455 163/325 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100536
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3883
SonicParanoid 1 1.000 - - X163
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.820

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