DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cathD and Ctse

DIOPT Version :9

Sequence 1:NP_001334713.1 Gene:cathD / 45268 FlyBaseID:FBgn0029093 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_031825.2 Gene:Ctse / 13034 MGIID:107361 Length:397 Species:Mus musculus


Alignment Length:403 Identity:187/403 - (46%)
Similarity:247/403 - (61%) Gaps:27/403 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VALLLVAFLAAAVAHPNSQEKPGLLRVPLHKFQSARR--------------HFADVGTELQQLRI 54
            :.|||:..|..|      |.:..|.||||.:.||.|:              |..|: |.|.:...
Mouse     5 LVLLLLLLLDLA------QAQGALHRVPLRRHQSLRKKLRAQGQLSEFWRSHNLDM-TRLSESCN 62

  Fly    55 RYGGGDVPEPLSNYMDAQYYGPIAIGSPPQNFRVVFDTGSSNLWVPSKKCHLTNIACLMHNKYDA 119
            .|  ..|.|||.||:|.:|:|.|:||:|||||.|:||||||||||||..|  |:.||..|..:..
Mouse    63 VY--SSVNEPLINYLDMEYFGTISIGTPPQNFTVIFDTGSSNLWVPSVYC--TSPACKAHPVFHP 123

  Fly   120 SKSKTYTKNGTEFAIQYGSGSLSGYLSTDTVSIAGLDIKDQTFAEALSEPGLVFVAAKFDGILGL 184
            |:|.|||:.|..|:||||:|||:|.:..|.||:.||.:..|.|.|::.|||..||.|:|||||||
Mouse   124 SQSDTYTEVGNHFSIQYGTGSLTGIIGADQVSVEGLTVDGQQFGESVKEPGQTFVNAEFDGILGL 188

  Fly   185 GYNSISVDKVKPPFYAMYEQGLISAPVFSFYLNRDPASPEGGEIIFGGSDPNHYTGEFTYLPVTR 249
            ||.|::...|.|.|..|..|.|::.|:||.||:.||....|.|:.|||.||:|::|...::|||:
Mouse   189 GYPSLAAGGVTPVFDNMMAQNLVALPMFSVYLSSDPQGGSGSELTFGGYDPSHFSGSLNWIPVTK 253

  Fly   250 KAYWQIKMDAASIGD-LQLCKGGCQVIADTGTSLIAAPLEEATSINQKIGGTPIIGGQYVVSCDL 313
            :|||||.:|...:|| :..|..|||.|.|||||||..|.::...:.:.||.|| |.|:|.|.|..
Mouse   254 QAYWQIALDGIQVGDTVMFCSEGCQAIVDTGTSLITGPPDKIKQLQEAIGATP-IDGEYAVDCAT 317

  Fly   314 IPQLPVIKFVLGGKTFELEGKDYILRVAQMGKTICLSGFMGLDIPPPNGPLWILGDVFIGKYYTE 378
            :..:|.:.|::...::.|...||||.....|...|.|||.|||||||.|||||||||||.::|:.
Mouse   318 LDTMPNVTFLINEVSYTLNPTDYILPDLVEGMQFCGSGFQGLDIPPPAGPLWILGDVFIRQFYSV 382

  Fly   379 FDMGNDRVGFADA 391
            ||.||::||.|.|
Mouse   383 FDRGNNQVGLAPA 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cathDNP_001334713.1 None
CtseNP_031825.2 A1_Propeptide 22..50 CDD:285240 8/27 (30%)
Asp 78..395 CDD:278455 160/319 (50%)
pepsin_retropepsin_like 79..394 CDD:299705 159/317 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S917
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100536
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X163
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.780

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