DRSC/TRiP Functional Genomics Resources

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Protein Alignment cathD and LOC101733630

DIOPT Version :10

Sequence 1:NP_652013.1 Gene:cathD / 45268 FlyBaseID:FBgn0029093 Length:392 Species:Drosophila melanogaster
Sequence 2:XP_012817292.3 Gene:LOC101733630 / 101733630 XenbaseID:XB-GENE-29087091 Length:343 Species:Xenopus tropicalis


Alignment Length:326 Identity:211/326 - (64%)
Similarity:252/326 - (77%) Gaps:1/326 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 YMDAQYYGPIAIGSPPQNFRVVFDTGSSNLWVPSKKCHLTNIACLMHNKYDASKSKTYTKNGTEF 132
            |:.|||||.|.:|||||||.||||||||||||||..|.:.:|||.||:|||:|||.||.||||.|
 Frog    18 YLQAQYYGEIGLGSPPQNFTVVFDTGSSNLWVPSVHCSMLDIACWMHHKYDSSKSSTYVKNGTAF 82

  Fly   133 AIQYGSGSLSGYLSTDTVSIAGLDIKDQTFAEALSEPGLVFVAAKFDGILGLGYNSISVDKVKPP 197
            |||||:||||||||.|||:|..|.:|.|.|.||:.:||:.|||||||||||:.|..||||.|.|.
 Frog    83 AIQYGTGSLSGYLSKDTVTIGNLAVKGQMFGEAVKQPGVTFVAAKFDGILGMAYPVISVDGVPPV 147

  Fly   198 FYAMYEQGLISAPVFSFYLNRDPASPEGGEIIFGGSDPNHYTGEFTYLPVTRKAYWQIKMDAASI 262
            |..:..|.|:.:.:|||||||:|.:..|||::.||:||.:|||:|.||.|||||||||.||...:
 Frog   148 FDNIMAQKLVESNIFSFYLNRNPDTQPGGELLLGGTDPKYYTGDFHYLNVTRKAYWQIHMDQLGV 212

  Fly   263 GD-LQLCKGGCQVIADTGTSLIAAPLEEATSINQKIGGTPIIGGQYVVSCDLIPQLPVIKFVLGG 326
            || |.||||||:||.|||||||..||||.|::.:.||..|:|.|||:|.||.:|.||||...|||
 Frog   213 GDQLTLCKGGCEVIVDTGTSLITGPLEEVTALQKAIGAVPLIQGQYMVQCDKVPTLPVISLTLGG 277

  Fly   327 KTFELEGKDYILRVAQMGKTICLSGFMGLDIPPPNGPLWILGDVFIGKYYTEFDMGNDRVGFADA 391
            :.:.|.|:.||::|:|.|.||||||||||:||||.||||||||||||:||:.||...||||||.|
 Frog   278 QVYTLTGEQYIMKVSQRGSTICLSGFMGLNIPPPAGPLWILGDVFIGQYYSVFDRAYDRVGFAKA 342

  Fly   392 K 392
            |
 Frog   343 K 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cathDNP_652013.1 A1_Propeptide 29..56 CDD:462326
pepsin_retropepsin_like 62..389 CDD:472175 207/321 (64%)
LOC101733630XP_012817292.3 Cathepsin_D2 18..341 CDD:133157 208/322 (65%)
Blue background indicates that the domain is not in the aligned region.

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