Protein Alignment deltaCOP and arcn1b

DIOPT Version :10

• Sequence 1: NP_652012.1
• Gene: deltaCOP / 45250
• FlyBaseID: FBgn0028969
• Length: 532
• Species: Drosophila melanogaster
• Sequence 2: NP_973722.1
• Gene: arcn1b / 399661
• ZFINID: ZDB-GENE-040121-7
• Length: 512
• Species: Danio rerio
• Alignment Length: 537
• Identity: 312/537 - (58%)
• Similarity: 392/537 - (72%)
• Gaps: 30/537 - (5%)

  Fly     1 MVLIAAAVCTKNGKVILSRQFVEMTKARIEGLLAAFPKLMTAGKQHTYVETDSVRYVYQPMEKLY 65
            |||:|||||||.||.|:||||||||:.|:|||||||||||..|||||:||||||||||||:||||
Zfish     1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRVEGLLAAFPKLMNTGKQHTFVETDSVRYVYQPLEKLY 65

  Fly    66 MLLITTKASNILEDLETLRLFSKVIPEYSHSLDEKEIVENAFNLIFAFDEIVALGYRESVNLAQI 130
            |:|||||.||||||||||||||:|||||...|:|.||.|:.|:|||||||||||||||:||||||
Zfish    66 MVLITTKNSNILEDLETLRLFSRVIPEYCRVLEESEISEHCFDLIFAFDEIVALGYRENVNLAQI 130

  Fly   131 KTFVEMDSHEEKVYQAVRQTQERDARQKMREKAKELQRQRMEASKRGGPSLGGIGSRSGGFSADG 195
            :||.|||||||||::|||:||||:|:.:|:.|||||||.|.:|.:        .|.:|.||.  |
Zfish   131 RTFTEMDSHEEKVFRAVRETQEREAKAEMKRKAKELQRARQDAER--------AGKKSPGFG--G 185

  Fly   196 IGSSGVSSSSGASSANTGITSIDVDTKSKAAAS--KPA-SRNALKLGGKSKDVDSFVDQLKNEGE 257
            .||||:||.:.|    |.||......|.|.|.:  :|: |..|||||.|.|:||.|||:||:|||
Zfish   186 FGSSGMSSITSA----TIITDTIEPEKPKVAPASVRPSGSSKALKLGAKGKEVDFFVDKLKSEGE 246

  Fly   258 KIANLAPAAPAGGSSAAASASAAAKAAIASDIHKESVHLKIEDKLVVRLGRDGGVQQFENSGLLT 322
            .|..         :||...||.|:| .:...::.|||||::|:|:.:..|||||:|..|..|::|
Zfish   247 NIVT---------TSAGRKASEASK-VLQPPVNMESVHLRVEEKISLTCGRDGGLQNMEVLGMIT 301

  Fly   323 LRITDEAYGRILLKLSPNHTQGLQLQTHPNVDKELFKSRTTIGLKNLGKPFPLNTDVGVLKWRFV 387
            |::.||..|||::.::.|..:|.||||||:|||:||.:.:.|||||..|.||||:|:||||||..
Zfish   302 LKVADEKNGRIIIVVNNNDKKGAQLQTHPHVDKKLFTNESLIGLKNQEKSFPLNSDLGVLKWRLQ 366

  Fly   388 SQDESAVPLTINCWPSDNGEG-GCDVNIEYELEAQQLELQDVAIVIPLPMNV-QPSVAEYDGTYN 450
            |.|||.:|||||||||::|.| ||||||||||:.:.|||.||.|.||:|..| .|.|.:.||.||
Zfish   367 STDESLIPLTINCWPSESGSGSGCDVNIEYELQDEGLELNDVVITIPVPSGVGAPVVGDLDGQYN 431

  Fly   451 YDSRKHVLQWHIPIIDAANKSGSMEFSCSASIPGDFFPLQVSFVSKTPYAGVVAQDVVQVDSEAA 515
            :||||::|:|.:|:||..|||||:|||.... |.||||:.||||||..:..:....|..|:..:.
Zfish   432 HDSRKNILEWSLPVIDEKNKSGSLEFSIDGK-PNDFFPINVSFVSKRNFCDIQVAKVTYVEGGSP 495

  Fly   516 VKYSSESILFVEKYEIV 532
            ||:|||:...|:||||:
Zfish   496 VKFSSETSFVVDKYEIL 512

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
deltaCOP	NP_652012.1	Delta_COP_N	4..133	CDD:341434	103/128 (80%)
		AP_delta-COPI_MHD	292..529	CDD:271162	129/238 (54%)
arcn1b	NP_973722.1	Delta_COP_N	4..133	CDD:341434	103/128 (80%)
		AP_delta-COPI_MHD	271..509	CDD:271162	129/238 (54%)