DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eEF1beta and AT5G19510

DIOPT Version :9

Sequence 1:NP_001286506.1 Gene:eEF1beta / 45249 FlyBaseID:FBgn0028737 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_568375.2 Gene:AT5G19510 / 832071 AraportID:AT5G19510 Length:224 Species:Arabidopsis thaliana


Alignment Length:233 Identity:110/233 - (47%)
Similarity:141/233 - (60%) Gaps:22/233 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAFGDVTTPQGLKELNAFLADNSYISGYTPSKADLSVFDALGKAPSADNVNVARWYRHIASFEAA 65
            :.|.|:.|.:|:|.:...||..:||||...|..|:.|:.|:...||....|.::||..:||..| 
plant     3 VTFSDLHTEEGVKSVEEHLAGKTYISGDQLSVDDVKVYAAVPVKPSDAFPNASKWYESVASQLA- 66

  Fly    66 ERAAWSGTPLPQLAGGKPTVAAAAK-----PAADDDDDVDLFGSDDEEDEEAERIKQERVAAYAA 125
              .::.|..:....||....|.|.:     .|||||||:||||.:.||:::|   .:||.|  |.
plant    67 --KSFPGKAVGVQFGGSAAAAPAVEAEAPAAAADDDDDMDLFGDETEEEKKA---AEEREA--AK 124

  Fly   126 KKSKKPALIAKSSVLLDVKPWDDETDMKEMENNVRTIEMDGLLWGASKLVPVGYGINKLQIMCVI 190
            |.:|||....|||||:||||||||||||::|..||.:||.||.|||||||||||||.||.||..|
plant   125 KDTKKPKESGKSSVLMDVKPWDDETDMKKLEEAVRGVEMPGLFWGASKLVPVGYGIKKLTIMFTI 189

  Fly   191 EDDKVSIDLLQEKIEEF------EDFVQSVDIAAFNKI 222
            .||.||.|.|   ||:|      .:::||.||.|||||
plant   190 VDDLVSPDNL---IEDFLTSEPNNEYIQSCDIVAFNKI 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF1betaNP_001286506.1 GST_C_eEF1b_like <3..62 CDD:198341 21/58 (36%)
EF1_GNE 139..222 CDD:279125 55/88 (63%)
AT5G19510NP_568375.2 GST_C_family <5..63 CDD:413470 20/57 (35%)
EF1_GNE 138..224 CDD:395597 55/88 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 121 1.000 Domainoid score I1858
eggNOG 1 0.900 - - E1_COG2092
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1480
Inparanoid 1 1.050 205 1.000 Inparanoid score I1280
OMA 1 1.010 - - QHG53756
OrthoDB 1 1.010 - - D1464823at2759
OrthoFinder 1 1.000 - - FOG0001111
OrthoInspector 1 1.000 - - otm2677
orthoMCL 1 0.900 - - OOG6_101695
Panther 1 1.100 - - O PTHR11595
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X680
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

Return to query results.
Submit another query.