DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eEF1beta and Cars

DIOPT Version :9

Sequence 1:NP_001286506.1 Gene:eEF1beta / 45249 FlyBaseID:FBgn0028737 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_038770.3 Gene:Cars / 27267 MGIID:1351477 Length:831 Species:Mus musculus


Alignment Length:296 Identity:71/296 - (23%)
Similarity:116/296 - (39%) Gaps:107/296 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LKELNAFLADNSYISGYTPSKADLSVFDALGKAPSADN--VNVARWYRHI--------------- 59
            ::.|:..|:..|||.||:.|:||:.||..| .||.||:  .:||||:|||               
Mouse    25 VQALDQHLSTRSYIQGYSLSQADVDVFRQL-SAPPADSRLFHVARWFRHIEALLGGPQGRDEPCR 88

  Fly    60 --ASFEAAERAAWS---GTP-----------------LPQLAGGK--------PTVAAAA----- 89
              ||.....:..||   ||.                 :||  .||        |||..|:     
Mouse    89 LQASKGRRVQPQWSPPAGTEPCRLRLYNSLTRNKDVFIPQ--DGKKVTWYCCGPTVYDASHMGHA 151

  Fly    90 ---------KPAADDDDDVDLF---GSDDEEDEEAERIKQERV-AAYAAKKSKKPALIAKSSVLL 141
                     :....|....|:|   ...|.:|:...|.:|..: ..|  ::.|.||    :.:|.
Mouse   152 RSYISFDILRRVLRDYFQYDVFYCMNITDIDDKIIRRARQNYLFEQY--REQKPPA----TQLLK 210

  Fly   142 DV----KPW----DDETD------MKEMENNVRTIEMDGLLWGASKLVPVGYGINKLQIMCVIED 192
            ||    ||:    .:.||      ::.::|:|:.         |::  |:...: :..:.....|
Mouse   211 DVRDAMKPFSVKLSETTDPDKRQMLERIQNSVKL---------ATE--PLEQAV-RSSLSGEEVD 263

  Fly   193 DKVSIDLLQEKIEEFEDFVQS------VDIAAFNKI 222
            .||.: ||:|..:...|::.|      .|.:.|:|:
Mouse   264 SKVQV-LLEEAKDLLSDWLDSTGGSEVTDNSIFSKL 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF1betaNP_001286506.1 GST_C_eEF1b_like <3..62 CDD:198341 25/68 (37%)
EF1_GNE 139..222 CDD:279125 21/102 (21%)
CarsNP_038770.3 GST_C_CysRS_N 4..76 CDD:198343 24/51 (47%)
PTZ00399 91..827 CDD:240402 47/229 (21%)
CysRS_core 113..528 CDD:173899 41/207 (20%)
'HIGH' region 140..150 4/9 (44%)
'KMSKS' region 489..493
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 736..766
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2092
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.