DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eEF1beta and eef-1B.1

DIOPT Version :9

Sequence 1:NP_001286506.1 Gene:eEF1beta / 45249 FlyBaseID:FBgn0028737 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_498737.1 Gene:eef-1B.1 / 176120 WormBaseID:WBGene00018846 Length:213 Species:Caenorhabditis elegans


Alignment Length:221 Identity:129/221 - (58%)
Similarity:155/221 - (70%) Gaps:14/221 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DVTTPQGLKELNAFLADNSYISGYTPSKADLSVFDALGKAPSADNV-NVARWYRHIASFEAAERA 68
            ||.:|.||...|..||:.::.:|:..|..|..:|.|||.||:|... ||||||.::||:..|||.
 Worm     4 DVKSPAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVASYTDAERK 68

  Fly    69 AWSGTPLPQLAGGKPTVAAAAKPAADDDDDVDLFGSDD-EEDEEAERIKQERVAAYAAKKSKKPA 132
            .|:.      |||....||||     |.||.||||||| |||.|..:|.:||:||||.||:||..
 Worm    69 TWAS------AGGSAPAAAAA-----DGDDFDLFGSDDEEEDAEKAKIVEERLAAYAEKKAKKAG 122

  Fly   133 LIAKSSVLLDVKPWDDETDMKEMENNVRTIEMDGLLWGASKLVPVGYGINKLQIMCVIEDDKVSI 197
            .||||||:|||||||||||:.|||..||:||||||:||.:||:|:||||.||||:.||||.|||:
 Worm   123 PIAKSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSV 187

  Fly   198 DLLQEKIE-EFEDFVQSVDIAAFNKI 222
            |.|.|||. :|||.||||||.|||||
 Worm   188 DDLIEKITGDFEDHVQSVDIVAFNKI 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF1betaNP_001286506.1 GST_C_eEF1b_like <3..62 CDD:198341 25/57 (44%)
EF1_GNE 139..222 CDD:279125 60/83 (72%)
eef-1B.1NP_498737.1 GST_C_family <1..62 CDD:295467 25/57 (44%)
EF-1_beta_acid 90..>110 CDD:287546 12/19 (63%)
EF1_GNE 129..213 CDD:279125 60/83 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167115
Domainoid 1 1.000 126 1.000 Domainoid score I3353
eggNOG 1 0.900 - - E1_COG2092
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1480
Inparanoid 1 1.050 232 1.000 Inparanoid score I2174
Isobase 1 0.950 - 0 Normalized mean entropy S637
OMA 1 1.010 - - QHG53756
OrthoDB 1 1.010 - - D1464823at2759
OrthoFinder 1 1.000 - - FOG0001111
OrthoInspector 1 1.000 - - otm40246
orthoMCL 1 0.900 - - OOG6_101695
Panther 1 1.100 - - LDO PTHR11595
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R365
SonicParanoid 1 1.000 - - X680
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1817.750

Return to query results.
Submit another query.