DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nckx30C and Slc24a3

DIOPT Version :9

Sequence 1:NP_652011.3 Gene:Nckx30C / 45248 FlyBaseID:FBgn0028704 Length:881 Species:Drosophila melanogaster
Sequence 2:NP_001343426.1 Gene:Slc24a3 / 94249 MGIID:2137513 Length:645 Species:Mus musculus


Alignment Length:623 Identity:223/623 - (35%)
Similarity:331/623 - (53%) Gaps:101/623 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   302 INDT---------HNDNSTTTKTPLFPKDLFTKEQLENGAVILHIIGVIYMFVALAIVCDEFFVP 357
            :|||         .:.|.|......||:|:|:.|....|||:||::..:|||.|||||||:||||
Mouse    69 VNDTLTSEDAGLQSSKNCTEPALHEFPRDIFSNEDRRQGAVVLHVLCAMYMFYALAIVCDDFFVP 133

  Fly   358 SLDVIIEKLGITDDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIGTIVGSAVFNILFVIGMCA 422
            ||:.|.|:|.:::|||||||||||.|||||||||||||::..|||:||||||||||||.:||:|.
Mouse   134 SLEKICERLHLSEDVAGATFMAAGSSAPELFTSVIGVFITKGDVGVGTIVGSAVFNILCIIGVCG 198

  Fly   423 LFSKTVLSLTWWPLFRDCSFYSISLLVLIYFFRDNRIFWWEALILFTIYIGYVAFMKWNVQVETC 487
            ||:..|::|:.|.|.||..:|::|::.||.|..|.::.|||:|:|..:|:.|:..||:|..:..|
Mouse   199 LFAGQVVALSSWCLLRDSIYYTLSVVALIVFIYDEKVSWWESLVLVLMYLIYIVIMKYNACIHQC 263

  Fly   488 VKKMITKNKVTRVRSTDQLMPAGNAANSSETSMATQPGGSVTSRAASETRSGPPGSSNAGATGNS 552
            .::. ||.             |||..|                           |.:|.....:|
Mouse   264 FERR-TKG-------------AGNMVN---------------------------GLANNAEIDDS 287

  Fly   553 SGGGGTSGSTQTGAKFRHGLLQLMIHTIDPLHDGKVDEKATQL-HAI----ASLKVLLDATKPQR 612
            |....|....:. |.|......:|           |||..:.. |.:    |.|::::.:..|.:
Mouse   288 SNCDATVVLLKK-ANFHRKASVIM-----------VDELLSAYPHQLSFSEAGLRIMITSHFPPK 340

  Fly   613 GGATTSAANHVKINLKETTLADR--PNGNIDTTLDSPSL----SGRRPSWIEQRVKIQTRKFSIK 671
              ...|.|:.:.||.::..:..|  .||..:..:..|..    :|..||....|....||:..|.
Mouse   341 --TRLSMASRMLINERQRLINSRAYTNGESEVAIKIPIKHTVENGTGPSSAPDRGVNGTRRDDIV 403

  Fly   672 A----------------------PEIEDEPE-PLSMAWPDTAR-KRLTYVLVAPLLVPMWLTLPD 712
            |                      .|.||:.| |.:...|.:.: :.:.:....||...::.|:|:
Mouse   404 AETDNETENENEDNENNENDEEEEEDEDDDEGPYTPFDPPSGKLETVKWAFTWPLSFVLYFTVPN 468

  Fly   713 TRTPRGKRFFPVTFIGSIVWIAAFSYLMVWWANVAGDTARIPPEVMGLTFLAAGTSIPDLITSVI 777
            ...|..:::|.|||..|.:|||||||:|||...:.|.|..||..:||:||||||||:||.:.|:|
Mouse   469 CNKPHWEKWFMVTFASSTLWIAAFSYMMVWMVTIIGYTLGIPDVIMGITFLAAGTSVPDCMASLI 533

  Fly   778 VARKGFGDMAVSSSVGSNIFDVTVGLPIPWLL--YGIIYGAPVEVNSVGMVCSITILFMMLVFVV 840
            |||:|.||||||:|:|||:||:.:||.:||.|  ..:.||:.:.:||.|::.|:.:|...:...|
Mouse   534 VARQGMGDMAVSNSIGSNVFDILIGLGLPWALQTLAVDYGSYIRLNSRGLIYSVGLLLASVFVTV 598

  Fly   841 MSIACFRWRMNKGLGFTMFLLYFAFVAVSLMFEYDVIT 878
            ..:...:|:::|.||.....||..|:..|:|.|::|.|
Mouse   599 FGVHLNKWQLDKKLGCGCLFLYGVFLCFSIMTEFNVFT 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nckx30CNP_652011.3 Na_Ca_ex 336..480 CDD:279963 84/143 (59%)
Na_Ca_ex 721..871 CDD:279963 70/151 (46%)
Slc24a3NP_001343426.1 Na_Ca_ex <89..631 CDD:332332 215/596 (36%)
Alpha-1 148..188 33/39 (85%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 379..398 4/18 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 404..442 6/37 (16%)
Alpha-2 520..551 21/30 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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