DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nckx30C and Slc24a2

DIOPT Version :10

Sequence 1:NP_652011.3 Gene:Nckx30C / 45248 FlyBaseID:FBgn0028704 Length:881 Species:Drosophila melanogaster
Sequence 2:NP_113931.1 Gene:Slc24a2 / 84550 RGDID:628650 Length:670 Species:Rattus norvegicus


Alignment Length:731 Identity:338/731 - (46%)
Similarity:434/731 - (59%) Gaps:116/731 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 SRSRCR----SRRCLRLPIYSILLLCLTTQGLGLGDAAKPRPAKQHFGGSNSNSPNQNQNHNDVL 243
            |.|.||    :|:.|:|         :...||.:|..|...........:.:.|.|.....:||.
  Rat    20 SPSGCRRHYNTRKKLKL---------IRVIGLVMGLVAVSTVPFSISAFTETYSQNNRGEASDVT 75

  Fly   244 GGVGAPSQTSGEDEAEIMYPFQSGEQMFGLEE---DQEQDPELNSNAVPGSDEDNAGNQRGINDT 305
            |...||....              ..:..|.:   |....|       |.|.||.:.|  |.:..
  Rat    76 GPRAAPGHRQ--------------RTLLDLNDKIRDYTPQP-------PASQEDRSEN--GTDHA 117

  Fly   306 HNDNSTTTKTPLFPKDLFTKEQLENGAVILHIIGVIYMFVALAIVCDEFFVPSLDVIIEKLGITD 370
            ..|         :|||:|:.|:...||:|||:||:||||:||||||||||||||.||.|||||:|
  Rat   118 QGD---------YPKDVFSLEERRKGAIILHVIGMIYMFIALAIVCDEFFVPSLTVITEKLGISD 173

  Fly   371 DVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIGTIVGSAVFNILFVIGMCALFSKTVLSLTWWP 435
            ||||||||||||||||||||:||||::..:|||||||||||||||||||||||||:.:|:|||||
  Rat   174 DVAGATFMAAGGSAPELFTSLIGVFIAHSNVGIGTIVGSAVFNILFVIGMCALFSREILNLTWWP 238

  Fly   436 LFRDCSFYSISLLVLIYFFRDNRIFWWEALILFTIYIGYVAFMKWNVQVETCVKKMITKNKVTRV 500
            ||||.|||.:.|::||.||.||.|.|||:|:|.|.|..||.|||:|||||..||:||.:|||.:|
  Rat   239 LFRDVSFYIVDLIMLIIFFLDNVIMWWESLLLLTAYFAYVVFMKFNVQVERWVKQMINRNKVVKV 303

  Fly   501 RSTDQLMPAGNAANSSETSMATQPGGSVTSRAASETRSGPPGSSNAGATGNSSGGGGTSGSTQTG 565
            ..::....|..|.:..|.::..:|                           ....||:|.|.. .
  Rat   304 TVSEAQAKASTAGDKEEPTLPNKP---------------------------RLQRGGSSASLH-N 340

  Fly   566 AKFRHGLLQLMIHTIDPL-----------------HDGKVDEKATQLHAIASLKVLLDATKPQRG 613
            :..|:.:.||||||:|||                 .:|:..|||:.||.||..|..:|..:.|.|
  Rat   341 SLMRNSIFQLMIHTLDPLAEELGSYGKLKYYDTMTEEGRFREKASILHKIAKKKCQVDENERQNG 405

  Fly   614 GATTSAANHVKINLKETTLADRPNGNIDTTLDSPSLSGRRPSWIEQRVKIQTRKFSIKAPEI--- 675
                 |||||....::..|.:..:..::.|   ||.....|      |:......||:|.:.   
  Rat   406 -----AANHVDYAAEKIELPNSTSTEVEMT---PSSEASEP------VQNGNLSHSIEAADAPQA 456

  Fly   676 -----EDEPEPLSMAWPDTARKRLTYVLVAPLLVPMWLTLPDTRTPRGKRFFPVTFIGSIVWIAA 735
                 ||:.:|||::||...||::|:::|.|::.|:|:||||.|.|..|:|||:||.|||.|||.
  Rat   457 TETAEEDDDQPLSLSWPSNTRKQITFLIVLPIVFPLWITLPDVRKPASKKFFPITFFGSITWIAV 521

  Fly   736 FSYLMVWWANVAGDTARIPPEVMGLTFLAAGTSIPDLITSVIVARKGFGDMAVSSSVGSNIFDVT 800
            |||||||||:..|:|..|..|:||||.||||||||||||||||||||.|||||||||||||||:|
  Rat   522 FSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDIT 586

  Fly   801 VGLPIPWLLYGIIYG-APVEVNSVGMVCSITILFMMLVFVVMSIACFRWRMNKGLGFTMFLLYFA 864
            ||||:|||||.||:. .||.|:|.|:.|:|.:||:||:||::|||..:|||||.|||.||.||||
  Rat   587 VGLPLPWLLYTIIHRFKPVTVSSNGLFCAIVLLFIMLIFVILSIALCKWRMNKILGFIMFGLYFA 651

  Fly   865 FVAVSLMFEYDVITCP 880
            |:.||::.|..|:.||
  Rat   652 FLVVSVLLEDKVLECP 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nckx30CNP_652011.3 2A1904 <318..880 CDD:273344 308/587 (52%)
Slc24a2NP_113931.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 67..86 5/32 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..122 10/48 (21%)
2A1904 <99..670 CDD:273344 318/629 (51%)
Alpha-1 175..215 33/39 (85%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 312..335 6/49 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 394..414 9/24 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 450..471 6/20 (30%)
Alpha-2 550..581 29/30 (97%)

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