DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nckx30C and CAX11

DIOPT Version :9

Sequence 1:NP_652011.3 Gene:Nckx30C / 45248 FlyBaseID:FBgn0028704 Length:881 Species:Drosophila melanogaster
Sequence 2:NP_172370.3 Gene:CAX11 / 837416 AraportID:AT1G08960 Length:546 Species:Arabidopsis thaliana


Alignment Length:642 Identity:141/642 - (21%)
Similarity:230/642 - (35%) Gaps:210/642 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   311 TTTKTPLFP----KDLFTKEQL--------------------ENGAVILHIIGVIYMFVALAIVC 351
            |||..|.||    :.|....|:                    :||       |||..|.....:.
plant    28 TTTTIPTFPDHPLRSLLDDSQITTNSSSIVNPKSSCVSSRSHDNG-------GVINYFSLHYCIF 85

  Fly   352 DE---FFVPSLDVII-----------------------EKLGITDDVAGATFMAAGGSAPELFTS 390
            :|   |.:|.|.::|                       ::|.::..:|..|.:|.|..||::|.|
plant    86 NENLFFSIPILSLLILLHFYILIKTAQTHFSTVTTKLADRLNLSPSMAAVTLLALGNGAPDVFAS 150

  Fly   391 VIGVFVSFDDVGIGTIVGSAVFNILFVIGMCALFSKTVLSLTWWPL-----FRDCSFYSISLLVL 450
            |..:.......|.|.|:.:..|...||:|..|:::..      :|:     .||..||.|:.|.|
plant   151 VAALRGGQYRTGFGAILSAGTFVSAFVVGFVAIYAAP------FPVDAASFVRDVLFYLIAALFL 209

  Fly   451 IYFFRDNRIFWWEALILFTIYIGYVAFMKW-----NVQVETCVKKMITKNKVTRVRSTDQLMPAG 510
            .|.:....||.|:|:.....||.:|.|:.|     ||:    ..|.|::.:...:|..|      
plant   210 FYVYLSGEIFVWQAIGFVGFYIFFVGFVFWMDFGTNVE----KGKSISEEEKDLLRLQD------ 264

  Fly   511 NAANSSETSMATQPGGSVTSRAASETRSGPPGSSNAGATGNSSGGGGTSGSTQTGAKFR-HGLLQ 574
                                   .|..:|..||..|......||            .|| :|.:.
plant   265 -----------------------CEIAAGSLGSYKAEKEHQFSG------------IFRLYGTIS 294

  Fly   575 LMIHTIDPLHDGKVDEKATQLHAIASLKVLLDATKPQRGGATTS----AAN-------------- 621
            .|..|                    .:.|||:.|.|:...:..|    :||              
plant   295 RMWET--------------------PVSVLLNLTIPKPSPSEWSRFYRSANIVFCPFALLYTCNS 339

  Fly   622 HVKINLKETTLADRPNGNIDTTLDSPSLSGRRPSWIEQRVKIQTRKFSIKAPEIEDEPEPLSMAW 686
            .|::|...:.|.  ||.::             |.|:.  |...|...:.....:|.:|       
plant   340 FVQLNHPISFLF--PNTHL-------------PLWLV--VLFMTSSLAFLHFTVEKQP------- 380

  Fly   687 PDTARKRLTYVLVAPLLVPMWLTLPDTRTPRGKRFFPVTFIGSIVWIAAFSYLMVWWANVAGDTA 751
            |.|.:        .|::|                   |.||.|:.||:..:..::......|...
plant   381 PKTEQ--------LPVIV-------------------VAFIMSVFWISTIAGELLNCLAALGTLL 418

  Fly   752 RIPPEVMGLTFLAAGTSIPDLITSVIVARKGFGDMAVSSSVGSNIFDVTVGLPIPWLLY-GIIYG 815
            ::||.::|||.||.|.|:.||:..|.||:.|...||::......:|::.|||....::. ..:|.
plant   419 KLPPALLGLTVLAWGNSVGDLVADVAVAKAGRPAMAMAGCFAGPMFNMLVGLGSALVMQTANVYP 483

  Fly   816 APVEVN-SVGMVCSITILFMMLVFVVMSIACFRWRMNKGLGFTMFLLYFAFVAVSLM 871
            ...::. .||:|.:...|.:.|:..::.|...|:|:.:..|..:..||.||..|||:
plant   484 DAYKLGFHVGIVIAFVFLLLSLMGSLLVITWSRFRVPRFWGICLVGLYVAFTFVSLI 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nckx30CNP_652011.3 Na_Ca_ex 336..480 CDD:279963 44/174 (25%)
Na_Ca_ex 721..871 CDD:279963 44/151 (29%)
CAX11NP_172370.3 PLN03151 72..539 CDD:215604 130/595 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 70 1.000 Domainoid score I3391
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 135 1.000 Inparanoid score I1830
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.860

Return to query results.
Submit another query.