DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nckx30C and CG1090

DIOPT Version :9

Sequence 1:NP_652011.3 Gene:Nckx30C / 45248 FlyBaseID:FBgn0028704 Length:881 Species:Drosophila melanogaster
Sequence 2:NP_001262252.1 Gene:CG1090 / 40551 FlyBaseID:FBgn0037238 Length:633 Species:Drosophila melanogaster


Alignment Length:669 Identity:218/669 - (32%)
Similarity:321/669 - (47%) Gaps:105/669 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 VGAPSQTSGEDEAEIMYPFQSGEQMFGLEEDQEQDPELNSNA----VPGSDEDNAGNQ----RGI 302
            |||.::.:|:.||                 :.|..||.||.:    ...:.|..|..|    .|.
  Fly    33 VGALAEDAGDAEA-----------------NGEDTPERNSESSVLDTTLAFEPQASTQSTPIHGA 80

  Fly   303 NDT---HNDNSTTTKTPLFPKDLFTKEQLENGAVILHIIGVIYMFVALAIVCDEFFVPSLDVIIE 364
            ..|   ..||.|......||:.|..|...::|.:||||:..::.|..|||||||:||.|||.:.|
  Fly    81 VPTWRPKRDNCTPPAIEQFPQPLMNKWARQHGGLILHILVAVFTFFGLAIVCDEYFVASLDRLCE 145

  Fly   365 KLGITDDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIGTIVGSAVFNILFVIGMCALFSKTVL 429
            :|.::.|||||||||||.|||||.|.|||||.:.||:||..::|||||||:|||.:|||.|.||.
  Fly   146 ELKLSPDVAGATFMAAGSSAPELATVVIGVFFAKDDIGISGVIGSAVFNIMFVISVCALCSGTVC 210

  Fly   430 SLTWWPLFRDCSFYSISLLVLIYFFRDNRIFWWEALILFTIYIGYVAFMKWNVQVETCVKKMITK 494
            .|.||||.|||.||.:|:||::....::.|..:|::::...|:||...:.:|.::|.....:...
  Fly   211 QLNWWPLVRDCFFYCVSILVMLIIIFNDVISCFESVVMLLCYVGYCVALHFNTELERWALGLNLP 275

  Fly   495 NKVTRVRSTDQLMPAGNAANSSET--SMATQPGGSVTSRAASETRSGPPGS-----SNAGATGNS 552
            .|:........|:...|....|.|  |:....|...|.  .|||||..|.|     |:...|.:.
  Fly   276 FKLPSKEEQSALVTYKNVPEGSYTQESVGQTQGQKATD--DSETRSAKPQSDYQDYSDPNPTWDP 338

  Fly   553 SGGGGTSGSTQTGAKFRHGLLQLMIHTIDPLHD---GKVDEKATQLHAIASLKVLLDATKP---Q 611
            :...|.......            :....|:.|   |...::....||.....|:.....|   :
  Fly   339 NAAWGDESQPNP------------VANPPPVDDWGMGHSGQENMGYHADQPESVVTGDGPPAAVK 391

  Fly   612 RGGATTSAANHVKINLKETTLADRPNGNIDTTLDSPSLSGRRPSWIEQRVKIQTRKFSIKAPEIE 676
            .||...|            |.|....||                            ...|:.:.:
  Fly   392 SGGQVVS------------TQATSAGGN----------------------------DYYKSTDKQ 416

  Fly   677 DEP--EPLSMAWPDTARKRLTYVLVAPLLVPMWLTLPDTRTPRGKRFFPVTFIGSIVWIAAFSYL 739
            .||  :||...........:::.:|.|:......|:||.|..:.:.::|.||:.|:|||:.:||.
  Fly   417 REPRRDPLLRPMEGGLPALVSWYVVYPIHFLCKKTMPDCRQEQYRNWYPFTFLMSMVWISFYSYF 481

  Fly   740 MVWWANVAGDTARIPPEVMGLTFLAAGTSIPDLITSVIVARKGFGDMAVSSSVGSNIFDVTVGLP 804
            |||...|.|.|..||..||||||:|||.|:||.::|:.|.::||||||||:::|||:||:.|.|.
  Fly   482 MVWMITVIGSTLAIPDTVMGLTFVAAGVSVPDALSSIAVIKEGFGDMAVSNAIGSNVFDILVCLG 546

  Fly   805 IPWLLYGIIY--GAPVEVNSVGMVCSITILFMMLVFVVMSIACFRWRMNKGLGFTMFLLYFAFVA 867
            :||.:...|.  |:.|.|.|.|:..|...||..:||:::|.....|:::|.||..:.:.|..|:.
  Fly   547 LPWFIQTAIIKPGSHVNVISKGLAYSTLSLFSTVVFLILSTHLNGWKLDKRLGIILMVWYLFFIT 611

  Fly   868 VSLMFEYDVI------TCP 880
            ::.::|.:|.      .||
  Fly   612 LASLYELNVFGYMNPPECP 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nckx30CNP_652011.3 Na_Ca_ex 336..480 CDD:279963 77/143 (54%)
Na_Ca_ex 721..871 CDD:279963 66/151 (44%)
CG1090NP_001262252.1 TIGR00367 116..609 CDD:273039 188/546 (34%)
Na_Ca_ex 117..257 CDD:279963 77/139 (55%)
Na_Ca_ex 463..615 CDD:279963 66/151 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444753
Domainoid 1 1.000 70 1.000 Domainoid score I3391
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 135 1.000 Inparanoid score I1830
Isobase 1 0.950 - 0 Normalized mean entropy S2929
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 1 1.000 - - otm46991
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10846
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
87.940

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