DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nckx30C and CG5348

DIOPT Version :9

Sequence 1:NP_652011.3 Gene:Nckx30C / 45248 FlyBaseID:FBgn0028704 Length:881 Species:Drosophila melanogaster
Sequence 2:NP_611156.3 Gene:CG5348 / 36877 FlyBaseID:FBgn0034156 Length:625 Species:Drosophila melanogaster


Alignment Length:653 Identity:121/653 - (18%)
Similarity:213/653 - (32%) Gaps:197/653 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 NSTTTKTP---LFPKDLFTKEQLENGAVILHIIGVIYMFVALAI-VCDEFFVPSLDVIIEKLGIT 369
            ||:|...|   |...||....|.:....|...:...:..:.|.| ..:.::.|:|..:...|.:.
  Fly    55 NSSTNVIPYMRLLACDLKCINQFQEMIFIALFVAFCFQILVLLIYTINVYYSPALKAVSRFLHMN 119

  Fly   370 DDVAGATFMAAGGSAPELFTSV------IGVFVSFDDVGIGTIVGSAVFNILFVIGMCALFSKTV 428
            :.:||.|.||.|.::.:.|.::      :.||.:        .:.||:|.|....|:  :|..:.
  Fly   120 EHLAGVTLMAFGNTSADFFANLASVERHVPVFAN--------NLSSALFVITISGGL--IFYISP 174

  Fly   429 LSLTWWPLFRDCSFYSISLLVLIYF-FRDNRI---FWWEALILFTIYIGYV--------AFMKWN 481
            ..:..:...||..|..::.|::.|| :..|..   :.::..|:..:||.|:        ...|..
  Fly   175 FKMNSYETVRDILFLLLATLLMDYFAYTTNHFALGYEFKFFIVLLVYISYIIINVADVYLLQKTI 239

  Fly   482 VQVETCVKKMITKNK----------------------------------VTRVRSTDQLMPAGNA 512
            ....|.::|::.:.:                                  :||:|.|..       
  Fly   240 ASTRTKMQKLLDEKQTPEIALKLQDLERKLEYYSQDTRVEILEKSSSISITRIRYTTM------- 297

  Fly   513 ANSSETSMATQPGGSVTSRAASETRSGPPGSSNAGATGNSSGGGGTSGSTQTGAKFRHGLLQLMI 577
                  .|...|..||..|.....:.....|.|.|.                   ||...|.|..
  Fly   298 ------RMIRNPRVSVNRRYTRNMKLDYTQSKNQGI-------------------FRDFFLALRP 337

  Fly   578 HTIDPLHDGKVDEKATQL-----HAIASLKV-LLDATKPQRGGATTSAANHVKINLKETTLADRP 636
            .........::..:...|     ..|.:|.: |:|....:.|......|.:|.:|          
  Fly   338 IKCQAWKQAELLNRVLLLIRAPAVVICTLYIPLVDYEMEKHGWNKLLNAINVVVN---------- 392

  Fly   637 NGNIDTTLDSPSLSGRRPSWIEQRVKIQTRKFSIKAPEIEDEPEPLSMAWPDTARKRLTY----- 696
                      |:||      |...:....||.              :..|..:.:..|.|     
  Fly   393 ----------PALS------ISIFLSFMHRKG--------------NFLWYISLQNTLIYGASSF 427

  Fly   697 VLVAPLLVPMWLTLPDTRT---PRGKRFFPV-TFIGS--IVWIAAFSYLMVWWANVAGDTARIPP 755
            ||..|..|   ..|...||   |.....|.: ...||  ::::.|.....|  ..|.|:...|..
  Fly   428 VLTVPFAV---FILFHARTDVPPSYHWVFTIMNLTGSMFLIFLCATEIDTV--LEVIGNILSIDD 487

  Fly   756 EVMGLTFLAAGTSIPDLITSVIVARKGFGDMAVSSSVGSNIFDVTVGLPIPWLLYGIIYGAPVEV 820
            ..||.|..|...::..|..:..||..|:..||.:|::|.:.|.:            ::.|     
  Fly   488 NYMGATVKAFTGNLGTLFANTAVAIHGYPKMAFASAIGGSFFTI------------VVTG----- 535

  Fly   821 NSVGMVCSIT--------ILFMMLVFVVMSIACFR---W--------RMNKGL-GFTMFLLYFAF 865
            |:|..|.|:.        ..:..:.|:.:::|.|.   |        |.:.|| ...::::|..|
  Fly   536 NTVAYVRSLVGNRSEHHMEEYGEIAFIFLNMALFTILLWSTTLGFFARRSMGLYSIGLYVVYLLF 600

  Fly   866 VAV 868
            |.:
  Fly   601 VTL 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nckx30CNP_652011.3 Na_Ca_ex 336..480 CDD:279963 31/162 (19%)
Na_Ca_ex 721..871 CDD:279963 36/171 (21%)
CG5348NP_611156.3 Na_Ca_ex 86..>186 CDD:279963 21/109 (19%)
Na_Ca_ex 458..603 CDD:279963 35/163 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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