DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nckx30C and CG13223

DIOPT Version :9

Sequence 1:NP_652011.3 Gene:Nckx30C / 45248 FlyBaseID:FBgn0028704 Length:881 Species:Drosophila melanogaster
Sequence 2:NP_610656.1 Gene:CG13223 / 36190 FlyBaseID:FBgn0033599 Length:527 Species:Drosophila melanogaster


Alignment Length:614 Identity:122/614 - (19%)
Similarity:213/614 - (34%) Gaps:155/614 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   312 TTKTPLFPKDLFT-------KEQLENG-----AVILHIIGVIYMFVALAIVCDEFFVPSLDVIIE 364
            ||...|...:||.       |..:.|.     :|:...:..||:|..:.|....:|.|:|.||.:
  Fly    16 TTPDCLINMNLFNYLGWHYCKVDVRNSFNSFWSVLGMFLITIYVFWMMQITIKNYFCPTLMVIAD 80

  Fly   365 KLGITDDVAGATFMAAGGSAPELFTSVIG-------VFVSFDDVGIGTIVGSAVFNILFVIGMCA 422
            .|.:.:..||.|.:|....:|:.||::..       .|:|        .:..|:|..:||.|:..
  Fly    81 LLRMNESTAGVTVLAIANGSPDFFTAIASRVQTSKHSFLS--------CMSQAMFLHIFVAGLVI 137

  Fly   423 LFSKTVLSLTWWPLFRDCSFYSISLLVLIYFF-RDNRIFWWEALILFTIYIGY--VAFMKWNVQV 484
            |.....:....:  .||..|..::.:.:.|.. |...|.|..||....|::||  ||.:..::.:
  Fly   138 LTKPFNMRANTY--LRDFGFLFLNTVYMDYIHKRPKGISWLAALPSAFIFVGYVVVAIVDQHLLI 200

  Fly   485 ETCVKKMITKNKVTRVRSTDQLMPAGNAANSSETSMATQPGGSVTSRAASETRSGPPGSSNAGAT 549
            ....|....:..|......::|.|      ..|..:..|                        ..
  Fly   201 ARIQKMEQRQLNVAEALQLEELKP------QKEMPLKRQ------------------------EI 235

  Fly   550 GNSSGGGGTSGST------QTGAKFRHGLLQLMIHTIDPLHDGKVDEKATQLHAIAS------LK 602
            ...|.|.|:....      .|.|:|..          |..|.|..   ..:|:.|..      |:
  Fly   236 DRPSIGHGSRNKRIFRQFWNTVAEFDK----------DRFHRGTF---LVKLYLIVKQPIDMLLR 287

  Fly   603 VLL---DATKPQRGGATTSAANHVKINLKETTLADRPNGNIDTTLDSPSLSGRRPSWIEQRVKIQ 664
            :|:   |...||.|.:        |:..           ||...|        .|::|   ..|.
  Fly   288 ILIPKVDMEAPQYGWS--------KLLF-----------NIQVVL--------VPTYI---AYII 322

  Fly   665 TRKFSIKAPEIEDEPEPLSMAWPDTARKRLTYVLVAPLLVPM-WLTLPDTRTPRGKRFFPVTFIG 728
            .|.:||....:                    |::...|::|: .|....|||.....||  .|..
  Fly   323 VRGYSIAGLAV--------------------YMIALILMIPVATLIFFLTRTDTPPIFF--RFTS 365

  Fly   729 SIVWIAAFSYLMVWWANV------AGDTARIPPEVMGLTFLAAGTSIPDLITSVIVARKGFGDMA 787
            .:.::||...:......|      .....::..|....|.:....|..||:.::.:|.:|:..||
  Fly   366 GVGFMAAVFLIFCLTTEVNAMFFTMATILQVSQEFSLATAICWALSSNDLVANLSLAHQGWPRMA 430

  Fly   788 VSSSVGSNIFDVTVGLPIPWLLYGIIYGA----PVEVNSVGMVCSITILFMMLVFVVMSIACFRW 848
            ::::..:.:|...|.|.:|.::...:...    |.|......||  ..|.:.:.|.::|:....:
  Fly   431 MTATFSAPVFASFVFLALPLVVNSFVNAPGNIFPTEGGFGETVC--IFLEVGMGFSMLSVLTTNF 493

  Fly   849 RMNKGLGFTMFLLYFAFVAVSLMFEYDVI 877
            ::.:..||.:...|..||.|.::.|..||
  Fly   494 KLRRACGFLLVSYYIFFVGVLILLEKGVI 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nckx30CNP_652011.3 Na_Ca_ex 336..480 CDD:279963 39/153 (25%)
Na_Ca_ex 721..871 CDD:279963 32/159 (20%)
CG13223NP_610656.1 Na_Ca_ex 45..194 CDD:279963 40/158 (25%)
Na_Ca_ex 365..516 CDD:279963 29/152 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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