DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nckx30C and CG12376

DIOPT Version :9

Sequence 1:NP_652011.3 Gene:Nckx30C / 45248 FlyBaseID:FBgn0028704 Length:881 Species:Drosophila melanogaster
Sequence 2:NP_610405.3 Gene:CG12376 / 35857 FlyBaseID:FBgn0033323 Length:617 Species:Drosophila melanogaster


Alignment Length:623 Identity:117/623 - (18%)
Similarity:228/623 - (36%) Gaps:122/623 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 NSTTTKTP---LFPKDLFTKEQLENGAVILHIIGVIYMFVALAI-VCDEFFVPSLDVIIEKLGIT 369
            |.:|...|   :...||....:.|....:...:|:.|..:.|.| ||::::.|:|..:...|.:.
  Fly    47 NRSTNVLPYMRIMACDLNCVNEFEQVIFLALFMGLCYEILVLLIHVCNKYYSPALKAVSRFLCMN 111

  Fly   370 DDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIGTIVGS--AVFNILFVIGMCALFSKTVLSLT 432
            :.|||.|.:|.|.|:.:||:::..|     :..:.....|  |...:..|.|....:: :...:.
  Fly   112 EHVAGVTLLAFGNSSADLFSNLASV-----NANVPVFANSLAAALFVSMVSGGLICYT-SPFKMN 170

  Fly   433 WWPLFRDCSFYSISLLVLIYFFRDN-RIFWWEALILFTIYIGYV------------AFMKWNVQV 484
            .:...||..|.....::|.||...: .:.....:::|.:||.|:            |....|.|:
  Fly   171 AYESVRDILFLIFGSMLLQYFLASSAHVPETSFIVMFLVYIFYILVNVVDVYLIRRALKTTNAQI 235

  Fly   485 ETCVKKMITKNKVTRVRSTDQLMPAGNAANSSETSMATQPGGSV------TSRAASETRSGPPGS 543
            :..:...:|..|..|:...::...........|....|..|.::      |.|....||......
  Fly   236 DALLVGEMTPEKRKRLSELERNQAIYTRDMEVEIFERTNSGPNINKIRYTTLRMGRSTRISLDRK 300

  Fly   544 SNAGATGNSSGGGGTSGSTQTGAKFRHGLLQLMIHTIDPLH-----DGKVDEKATQLHAIASLKV 603
            :......|.:.|.            ..||.:.:...:.|::     .|.:.::|..|..|.::.:
  Fly   301 ATRMVLHNRALGR------------NWGLFKDLFIALRPINCEKWRKGNIIKRAFMLTKIPAVII 353

  Fly   604 ------LLDATKPQRGGATTSAANHVKINLKETTLADRPNGNIDTTLDSPSLSGRRPSWIEQRVK 662
                  |:|....:.|  .....|.:::.|                  :|::     |.:..:..
  Fly   354 CCIYIPLVDYELDKHG--WNKLLNCIQVML------------------NPAM-----SIMAIKAL 393

  Fly   663 IQTRKFSIKAPEIEDEPEPLSMAWPDTARKRLTYVLVA-PLLVPMWLTL-PDTRT---PRGKRFF 722
            :.:|..|:               |.....:...|.:.: |:.||:.:.: ..:||   |.....|
  Fly   394 LSSRGNSL---------------WYVAMGEEAIYAMYSLPITVPIAVFMFIQSRTDVPPFYHSVF 443

  Fly   723 PV-TFIGS--IVWIAAFSYLMVWWANVAGDTARIPPEVMGLTFLAAGTSIPDLITSVIVARKGFG 784
            .| ...||  :::|.|.....|  ..|.|...::..:.||.|..|...|:..||.:|.:|..|:.
  Fly   444 TVMNLTGSMFMIFICATEIDKV--LEVIGHILKVEDDFMGATVKACTGSLGPLIANVAMALHGYP 506

  Fly   785 DMAVSSSVGSNIFDVTVGLPIPWLLYGIIYGAPV-EVNSVGMVCSITILFMMLVFVVMSIACFR- 847
            .||.:|::|...|.|.:.......:.. ::|.|| |.|..|.       :.:..|:.:::..|. 
  Fly   507 RMAYASAIGGPFFTVVMSASTVMHVKN-LFGLPVSEANQTGN-------YGLNAFIFLNLGVFST 563

  Fly   848 --WRMNKG------LGFTMFLLYFAFVAVSLMFEYDVI 877
              |....|      :|....:.|..::..:::....||
  Fly   564 LLWSTTLGFFARRSVGIFSIVFYCIYLLFAILIHRKVI 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nckx30CNP_652011.3 Na_Ca_ex 336..480 CDD:279963 34/159 (21%)
Na_Ca_ex 721..871 CDD:279963 37/162 (23%)
CG12376NP_610405.3 PLN03151 33..592 CDD:215604 115/612 (19%)
Na_Ca_ex 85..219 CDD:279963 31/139 (22%)
Na_Ca_ex 448..595 CDD:279963 35/156 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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