DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nckx30C and zyd

DIOPT Version :9

Sequence 1:NP_652011.3 Gene:Nckx30C / 45248 FlyBaseID:FBgn0028704 Length:881 Species:Drosophila melanogaster
Sequence 2:NP_001015261.3 Gene:zyd / 3354992 FlyBaseID:FBgn0265767 Length:542 Species:Drosophila melanogaster


Alignment Length:588 Identity:191/588 - (32%)
Similarity:308/588 - (52%) Gaps:86/588 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 NSTTTKTPLFPKDLFTKEQLENGAVILHIIGVIYMFVALAIVCDEFFVPSLDVIIEKLGITDDVA 373
            |.|......||:|||::.|.::|||:||:|..:|:|||||:||||:|||:::.|...|.:::|||
  Fly    21 NCTQPAIDDFPRDLFSEAQRQSGAVVLHVIASLYLFVALAVVCDEYFVPAVEKICAALNMSNDVA 85

  Fly   374 GATFMAAGGSAPELFTSVIGVFVSFDDVGIGTIVGSAVFNILFVIGMCALFSKTVLSLTWWPLFR 438
            |||||||..||||||.:|||.|::..|:|:||||||||||||.|...|.:.:...:.|.||||.|
  Fly    86 GATFMAAATSAPELFVNVIGTFITEGDIGVGTIVGSAVFNILAVAACCGIGAGMTIPLDWWPLTR 150

  Fly   439 DCSFYSISLLVLIYFFRDNRIFWWEALILFTIYIGYVAFMKWNVQVETCVKKMITKNKVTRVRST 503
            |...|.:::.:||....|.|:.|:|||||.::|..|:|.|.::...:.|.|..: |...:|.||:
  Fly   151 DSIAYGVTVAILICVMHDERVEWYEALILVSLYAVYLAVMYFDKTFQKCAKGGV-KQARSRSRSS 214

  Fly   504 DQLMPAGNAANSSETSMATQPGGSVTSRAASETRSGPPGSSNAGATGNSSGGGGTSGSTQTGAKF 568
            :..:...| :|..|..:..   ..:....|:...:|......|.|| ::||.|.|:.|..|..  
  Fly   215 NCSIHTKN-SNEKEPELVE---NRICQNMANIQLNGGLNKEQAKAT-STSGAGTTAISITTST-- 272

  Fly   569 RHGLLQLMIHTIDPLHDGKVDEKATQL----HAIASLKVLLDATKPQRGGATTSAANHVKINLKE 629
                   |..|:...|.......|..|    .||..:..|.||          .|.:||.:    
  Fly   273 -------MTTTLSTTHSAGGGGGAVGLCSGPGAIVQMAPLDDA----------EAESHVAV---- 316

  Fly   630 TTLADRPNGNIDTTLDSPSLSGRRPSWIEQRVKIQTRKFSIKAPEIEDEPEPLSMAWPDTARKRL 694
             ..||               .||:                      |:....||.....:...:.
  Fly   317 -AAAD---------------EGRK----------------------EEGYSLLSYPKDKSCFAQF 343

  Fly   695 TYVLVAPLLVPMWLTLPDTRTPRGKRFFPVTFIGSIVWIAAFSYLMVWWANVAGDTARIPPEVMG 759
            |::::.|:.:...:.:||.:..:..:.||:|||..||||.:.||::.|...:.|||.:||..|||
  Fly   344 TWLIIWPIHLLFRIAIPDCKKAKNNKIFPLTFIMCIVWIGSLSYVVAWMITIIGDTLKIPDSVMG 408

  Fly   760 LTFLAAGTSIPDLITSVIVARKGFGDMAVSSSVGSNIFDVTVGLPIPWLLYGIIYGAPVE----- 819
            :||||||||:|:.::|||||::|.|.|.:.:|:|||.||:.:.|.:|||:..:.:  |::     
  Fly   409 ITFLAAGTSVPEAVSSVIVAKRGHGSMGICNSIGSNTFDILLCLGVPWLIKAVFF--PIQPGQNY 471

  Fly   820 --VNSVGMVCSITILFMMLVFVVMSIACFRWRMNKGLG------FTMFLLYFAFVAVSLMFEYDV 876
              :||.|:..|...|...|..:.::.:..:::::|.:|      :.:|:::.:.:.:::.|..::
  Fly   472 VAINSAGLEYSAITLLSTLFLLYLTFSTNKFKLDKKVGTACLVMYLVFMVFASLIELNVFFRVNL 536

  Fly   877 ITC 879
            .||
  Fly   537 PTC 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nckx30CNP_652011.3 Na_Ca_ex 336..480 CDD:279963 75/143 (52%)
Na_Ca_ex 721..871 CDD:279963 57/162 (35%)
zydNP_001015261.3 ECM27 46..522 CDD:223604 177/544 (33%)
Na_Ca_ex 48..192 CDD:279963 75/143 (52%)
Na_Ca_ex 370..525 CDD:279963 57/156 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444755
Domainoid 1 1.000 70 1.000 Domainoid score I3391
eggNOG 1 0.900 - - E1_COG0530
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 135 1.000 Inparanoid score I1830
Isobase 1 0.950 - 0 Normalized mean entropy S2929
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 1 1.000 - - otm46991
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10846
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
109.850

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