DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nckx30C and CG17167

DIOPT Version :10

Sequence 1:NP_652011.3 Gene:Nckx30C / 45248 FlyBaseID:FBgn0028704 Length:881 Species:Drosophila melanogaster
Sequence 2:NP_001015257.2 Gene:CG17167 / 3354991 FlyBaseID:FBgn0039941 Length:522 Species:Drosophila melanogaster


Alignment Length:614 Identity:161/614 - (26%)
Similarity:262/614 - (42%) Gaps:183/614 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   289 PGSDEDNAGNQRGINDTHNDNSTTTKTPLFPKDLFTKEQLENGAVILHIIGVIYMFVALAIVCDE 353
            ||.||.:..::..                   ||||.:||..|.|:||:...:|.|:.|||:|::
  Fly    58 PGEDEGSPMDEFA-------------------DLFTVDQLRQGWVVLHVFAAVYFFILLAIICND 103

  Fly   354 FFVPSLDVIIEKLGITDDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIGTIVGSAVFNILFVI 418
            :|:|:::.|.|.|.::.|||.|||||...|.||.||:.|...:...|:|:|||:||.:||.|.|.
  Fly   104 YFLPTVECICEDLHLSKDVAAATFMATATSMPEFFTNTISTLILESDMGLGTIIGSLMFNTLGVA 168

  Fly   419 GMCALFSKTVLSLTWWPLFRDCSFYSISLLVLIYFFRDNRIFWWEALILFTIYIGYVAFMKWNVQ 483
            |:.||.....:.|.|||:.|||..|..:.::|:       :..|...|.||              
  Fly   169 GLAALAIDKPVQLDWWPIARDCFIYVFNTIILL-------VLAWSGSISFT-------------- 212

  Fly   484 VETCVKK-------MITKNKVTRVRSTDQLMPA--------GNAANSSETSMATQPGGSVTSRAA 533
             |:|:..       :||.|       .::.|||        .|...|:...: |:|         
  Fly   213 -ESCIMMGFLILYYLITFN-------NNKFMPAIRVFIEDRMNCCFSTRYDL-TEP--------- 259

  Fly   534 SETRSGPPGSSNAGATGNSSGGGGTSGSTQTGAKFRHGLLQLMIHTIDPLH-DGKVDEKATQLHA 597
                  |..|:.|                           ||.:.. |||. ||           
  Fly   260 ------PENSAKA---------------------------QLPLKK-DPLSGDG----------- 279

  Fly   598 IASLKVLLDATKPQRGGATTSAANHVK---INLKETTLADRPNGNIDTTLDSPSLSGRRPSWIEQ 659
                  |.....|:...:.:|.||..:   :| .|..:||...|:|                   
  Fly   280 ------LFVLNLPENTSSMSSTANLTRNKHLN-DEDDVADVVPGSI------------------- 318

  Fly   660 RVKIQTRKFSIKAPEIEDEPEPLSMAWPDTAR--KRLTYVLVAPLLVPMWLTLPDTRTPRGKRFF 722
                                    .|:|..|.  .:..::.|.|:.|.:.|.:|  ...:.:|.:
  Fly   319 ------------------------YAYPRDASGWMQFWWIFVFPIKVTLSLLIP--HPMKYRRLY 357

  Fly   723 PVTFIGSIVWIAAFSYLMVWWANVAGDTARIPPEVMGLTFLAAGTSIPDLITSVIVARKGFGDMA 787
            |::||..|:.|...:||:||.....|....:|..||||||||||:::|:.::|:|..|.|...:.
  Fly   358 PLSFIMCILCIGGNAYLIVWMLTAFGVAIHVPTIVMGLTFLAAGSTMPEAVSSLISLRNGENGIG 422

  Fly   788 VSSSVGSNIFDVTVGLPIPWLLYGIIY---GAPVEVNSVGMVCSITILFM--MLVFVVMSIACFR 847
            ||:|:|:|...:.:.|.:||.:...|:   |.|.:|.:.|:..:|.||.:  |.:|:::|.:  .
  Fly   423 VSNSLGANSLAILLSLGVPWFIKNCIHYGTGEPQQVGTQGIEYNILILIISTMALFIILSFS--G 485

  Fly   848 WRMNKGLGFTMFLLYFAFVAVSLMFEYDV 876
            :|:.|.:|..:|.:|..|:.:.::.|.:|
  Fly   486 YRLTKRVGVALFTVYGVFIVLQILIEMNV 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nckx30CNP_652011.3 2A1904 <318..880 CDD:273344 157/585 (27%)
CG17167NP_001015257.2 2A1904 <53..>247 CDD:273344 74/236 (31%)
ECM27 133..507 CDD:440296 126/511 (25%)

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