DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nckx30C and Slc24a5

DIOPT Version :9

Sequence 1:NP_652011.3 Gene:Nckx30C / 45248 FlyBaseID:FBgn0028704 Length:881 Species:Drosophila melanogaster
Sequence 2:NP_778199.2 Gene:Slc24a5 / 317750 MGIID:2677271 Length:501 Species:Mus musculus


Alignment Length:562 Identity:173/562 - (30%)
Similarity:276/562 - (49%) Gaps:126/562 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 FPKDLFTKEQLENGAVILHIIGVIYMFVALAIVCDEFFVPSLDVIIEKLGITDDVAGATFMAAGG 382
            ||:..|||::..:|.::::.:.::||.:|::||||::|:|||::|.:.||::.|||||||||||.
Mouse    54 FPEGFFTKQESTDGGIVIYFLIILYMCMAISIVCDKYFLPSLEIISDSLGLSQDVAGATFMAAGS 118

  Fly   383 SAPELFTSVIGVFVSFDDVGIGTIVGSAVFNILFVIGMCALFSKTVLSLTWWPLFRDCSFYSISL 447
            |||||.|:.:|||::..|:||.||:|||::|:|.:...|.|.|..|.:|:.|||||||:.|::|:
Mouse   119 SAPELVTAFLGVFITKGDIGISTILGSAIYNLLGICAACGLLSNMVSTLSCWPLFRDCAVYAVSV 183

  Fly   448 LVLIYFFRDNRIFWWEALILFTIYIGYVAFMKWNVQVETCVKKMITKNKVTRVRSTDQLMPAGNA 512
            ..:.....||||:|:|...|..||..||..:.::..:...|.|..:.......|:.::.:     
Mouse   184 GAVFGIIFDNRIYWYEGAGLLLIYGLYVLLLCFDTTISRHVMKTCSPCCPCLARAMEERI----- 243

  Fly   513 ANSSETSMATQPGGSVTSRAASETRSGPPGSSNAGATGNSSGGGGTSGSTQTGAKFRHGLLQLMI 577
              ..:|.:..:....:..|..|.|.|                                |:.|   
Mouse   244 --EQQTLLGWEDESQLFIRRQSRTDS--------------------------------GIFQ--- 271

  Fly   578 HTIDPLHDGKVDEKATQLHAIASLKVLLDATKPQRGGATTSAANHVKINLKETTLADRPNGNIDT 642
                  .|....:.:..||.::.:.                                        
Mouse   272 ------EDSGYSQLSLSLHGLSQVS---------------------------------------- 290

  Fly   643 TLDSPSLSGRRPSWIEQRVKIQTRKFSIKAPEIEDEPEPLSMAWPDTARKRLTYVLVAPLLVPMW 707
                                             ||.|...||  |:...:|:.:||..|::..:.
Mouse   291 ---------------------------------EDPPSVFSM--PEADLRRIFWVLSLPIITLLA 320

  Fly   708 LTLPDTRTPRGKRFFPVTFIGSIVWIAAFSYLMVWWANVAGDTARIPPEVMGLTFLAAGTSIPDL 772
            ||.||.|....|.:|.:||..|.:||:||:|::||...|.|:|..||..|||||.|||||||||.
Mouse   321 LTTPDCRRKFWKNYFVITFFMSALWISAFTYILVWMVTVTGETLGIPDTVMGLTLLAAGTSIPDT 385

  Fly   773 ITSVIVARKGFGDMAVSSSVGSNIFDVTVGLPIPWLLYGII--YGAPVEVNSVGMVCSITILFMM 835
            :|||:|||||.||||:|:.||||:||: :.|.:||.:....  ..||:||||.|:......|.:.
Mouse   386 VTSVLVARKGKGDMAISNIVGSNVFDM-LCLGLPWFIKTAFTNASAPIEVNSKGLTYITISLNIS 449

  Fly   836 LVFVVMSIACFRWRMNKGLGFTMFLLYFAFVAVSLMFEYDVI 877
            ::|:.:::....|::::.||....:||.....:|:::|..:|
Mouse   450 ILFLFLAVHFNGWKLDRKLGVVCLVLYLGLATLSVLYEIGII 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nckx30CNP_652011.3 Na_Ca_ex 336..480 CDD:279963 69/143 (48%)
Na_Ca_ex 721..871 CDD:279963 67/151 (44%)
Slc24a5NP_778199.2 Na_Ca_ex 72..216 CDD:279963 69/143 (48%)
TIGR00367 77..477 CDD:273039 163/523 (31%)
Na_Ca_ex 334..485 CDD:279963 67/151 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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