DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nckx30C and SLC24A5

DIOPT Version :9

Sequence 1:NP_652011.3 Gene:Nckx30C / 45248 FlyBaseID:FBgn0028704 Length:881 Species:Drosophila melanogaster
Sequence 2:NP_995322.1 Gene:SLC24A5 / 283652 HGNCID:20611 Length:500 Species:Homo sapiens


Alignment Length:562 Identity:179/562 - (31%)
Similarity:278/562 - (49%) Gaps:127/562 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 FPKDLFTKEQLENGAVILHIIGVIYMFVALAIVCDEFFVPSLDVIIEKLGITDDVAGATFMAAGG 382
            ||:..||:::..:|.:|::.:.::|||:|::|||||:|:|||::|.|.||::.||||.||||||.
Human    54 FPEGFFTRQERRDGGIIIYFLIIVYMFMAISIVCDEYFLPSLEIISESLGLSQDVAGTTFMAAGS 118

  Fly   383 SAPELFTSVIGVFVSFDDVGIGTIVGSAVFNILFVIGMCALFSKTVLSLTWWPLFRDCSFYSISL 447
            |||||.|:.:|||::..|:||.||:|||::|:|.:...|.|.|.||.:|:.|||||||:.|:||.
Human   119 SAPELVTAFLGVFITKGDIGISTILGSAIYNLLGICAACGLLSNTVSTLSCWPLFRDCAAYTISA 183

  Fly   448 LVLIYFFRDNRIFWWEALILFTIYIGYVAFMKWNVQVETCVKKMITKNKVTRVRSTDQLMPAGNA 512
            ..::....||:::|:|..:|..||..||..:.:::::...:.|..:.......::.::       
Human   184 AAVLGIIYDNQVYWYEGALLLLIYGLYVLVLCFDIKINQYIIKKCSPCCACLAKAMER------- 241

  Fly   513 ANSSETSMATQPGGSVTSRAASETRSGPPGSSNAGATGNSSGGGGTSGSTQTGAKFRHGLLQLMI 577
             :..:..|..:..|....|..|.|.||.....              ||.:|..... |||.|:. 
Human   242 -SEQQPLMGWEDEGQPFIRRQSRTDSGIFYED--------------SGYSQLSISL-HGLSQVS- 289

  Fly   578 HTIDPLHDGKVDEKATQLHAIASLKVLLDATKPQRGGATTSAANHVKINLKETTLADRPNGNIDT 642
                                                                             
Human   290 ----------------------------------------------------------------- 289

  Fly   643 TLDSPSLSGRRPSWIEQRVKIQTRKFSIKAPEIEDEPEPLSMAWPDTARKRLTYVLVAPLLVPMW 707
                                             ||.|...:|  |:...||:.:||..|::..::
Human   290 ---------------------------------EDPPSVFNM--PEADLKRIFWVLSLPIITLLF 319

  Fly   708 LTLPDTRTPRGKRFFPVTFIGSIVWIAAFSYLMVWWANVAGDTARIPPEVMGLTFLAAGTSIPDL 772
            ||.||.|....|.:|.:||..|.:||:||:|::||...:.|:|..||..|||||.|||||||||.
Human   320 LTTPDCRKKFWKNYFVITFFMSAIWISAFTYILVWMVTITGETLEIPDTVMGLTLLAAGTSIPDT 384

  Fly   773 ITSVIVARKGFGDMAVSSSVGSNIFDVTVGLPIPWLL-YGIIYG-APVEVNSVGMVCSITILFMM 835
            |.||:|||||.||||:|:.||||:||: :.|.|||.: ...|.| ||.||||.|:......|.:.
Human   385 IASVLVARKGKGDMAMSNIVGSNVFDM-LCLGIPWFIKTAFINGSAPAEVNSRGLTYITISLNIS 448

  Fly   836 LVFVVMSIACFRWRMNKGLGFTMFLLYFAFVAVSLMFEYDVI 877
            ::|:.:::....|::::.||....|.|.....:|:::|..:|
Human   449 IIFLFLAVHFNGWKLDRKLGIVCLLSYLGLATLSVLYELGII 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nckx30CNP_652011.3 Na_Ca_ex 336..480 CDD:279963 71/143 (50%)
Na_Ca_ex 721..871 CDD:279963 69/151 (46%)
SLC24A5NP_995322.1 Na_Ca_ex <20..>224 CDD:332332 77/169 (46%)
Na_Ca_ex <290..490 CDD:332332 86/202 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.