DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nckx30C and Slc24a4

DIOPT Version :9

Sequence 1:NP_652011.3 Gene:Nckx30C / 45248 FlyBaseID:FBgn0028704 Length:881 Species:Drosophila melanogaster
Sequence 2:NP_742164.2 Gene:Slc24a4 / 238384 MGIID:2447362 Length:622 Species:Mus musculus


Alignment Length:615 Identity:224/615 - (36%)
Similarity:329/615 - (53%) Gaps:124/615 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 NSTTTKTPLFPKDLFTKEQLENGAVILHIIGVIYMFVALAIVCDEFFVPSLDVIIEKLGITDDVA 373
            |.|......||.|||:.::.::|||:|||:|.:|||.|||||||:||||||:.|.|||.:::|||
Mouse    76 NCTDPAIHEFPTDLFSNKERQHGAVLLHILGALYMFYALAIVCDDFFVPSLEKICEKLHLSEDVA 140

  Fly   374 GATFMAAGGSAPELFTSVIGVFVSFDDVGIGTIVGSAVFNILFVIGMCALFSKTVLSLTWWPLFR 438
            ||||||||.|.||||.||||||::..|||:||||||||||||.:||:|.||:..|:.||||.:.|
Mouse   141 GATFMAAGSSTPELFASVIGVFITHGDVGVGTIVGSAVFNILCIIGVCGLFAGQVVRLTWWAVCR 205

  Fly   439 DCSFYSISLLVLIYFFRDNRIFWWEALILFTIYIGYVAFMKWNVQVETCVKKMITKNKVTRVRST 503
            |..:|::|::|||.|..|..|.|||.|:|..:|:.|:..||:|::::|.   ..||.|       
Mouse   206 DSVYYTLSVIVLIAFIYDEEIVWWEGLVLIILYVFYILIMKYNMKMQTF---FTTKQK------- 260

  Fly   504 DQLMPAGNAANSSETSMATQPGGSVTSRAASETRSGPPGSSNAGATGNSSGGGGTSGSTQTGAKF 568
                   :.||.:..|...:.|                                           
Mouse   261 -------SIANGNPVSNELEDG------------------------------------------- 275

  Fly   569 RHGLLQLMIHTIDPLHDGKVDEKATQLHAIASLK----------VLLDA---------TKPQRG- 613
                        :.|:||..|:.:..|  :..:|          |::|.         |.|:.| 
Mouse   276 ------------NDLYDGSYDDPSVPL--LGQVKEKPPYGKTPVVMVDEILSSSPPKFTFPEAGL 326

  Fly   614 --------GATT--SAANHVKINLKETTLADRPNGNIDTTLDSPSLSGRRPSWIEQRVKIQTRKF 668
                    |..|  ..|:.:.||.:: .|.:..||    ....|..:||..:.....|.::..:.
Mouse   327 RIMITNKFGPRTRLRMASRIIINERQ-RLINSANG----VNSKPLQNGRHENMENGNVPVENPED 386

  Fly   669 SIKAPEIEDEPEP------------LS-MAWPDTARKRLTYVLVAPLLVPMWLTLPDTRTPRGKR 720
            ..:..|.:..|:|            || .:.|:....:..:|...||:..:.:|:|:...||.::
Mouse   387 PQQGQEQQPPPQPPPPEPESVETVFLSPFSMPEAKGDKAKWVFTWPLIFLLCVTIPNCSKPRWEK 451

  Fly   721 FFPVTFIGSIVWIAAFSYLMVWWANVAGDTARIPPEVMGLTFLAAGTSIPDLITSVIVARKGFGD 785
            ||.||||.:.:|||.|||||||...:.|.|..||..:||:||||||||:||.:.|:||||:|.||
Mouse   452 FFMVTFITATLWIAVFSYLMVWLVTIIGYTLGIPDVIMGITFLAAGTSVPDCMASLIVARQGLGD 516

  Fly   786 MAVSSSVGSNIFDVTVGLPIPWLLYGII--YGAPVEVNSVGMVCSITILFMMLVFVVMSIACFRW 848
            ||||:::|||:||:.|||.|||.|..::  ||:.|::||.|:|.|:.:|...:...|:.|...:|
Mouse   517 MAVSNTIGSNVFDILVGLGIPWGLQTMVINYGSTVKINSRGLVYSVVLLLGSVALTVLGIHLNKW 581

  Fly   849 RMNKGLGFTMFLLYFAFVAVSLMFEYDVIT 878
            |:::.||..:.:||..|:..|:|.|::|.|
Mouse   582 RLDRKLGIYVLVLYAVFLCFSIMIEFNVFT 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nckx30CNP_652011.3 Na_Ca_ex 336..480 CDD:279963 88/143 (62%)
Na_Ca_ex 721..871 CDD:279963 75/151 (50%)
Slc24a4NP_742164.2 Na_Ca_ex <80..606 CDD:332332 219/604 (36%)
Alpha-1 139..179 31/39 (79%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 358..408 9/53 (17%)
Alpha-2 495..526 20/30 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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