DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nckx30C and ncx-5

DIOPT Version :9

Sequence 1:NP_652011.3 Gene:Nckx30C / 45248 FlyBaseID:FBgn0028704 Length:881 Species:Drosophila melanogaster
Sequence 2:NP_505690.2 Gene:ncx-5 / 191715 WormBaseID:WBGene00003570 Length:656 Species:Caenorhabditis elegans


Alignment Length:634 Identity:266/634 - (41%)
Similarity:344/634 - (54%) Gaps:110/634 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   302 INDTHNDNSTTTKTPLFPKDLFTKEQLENGAVILHIIGVIYMFVALAIVCDEFFVPSLDVIIEKL 366
            |..|.|.||:.     ||.|:|:.:....|.||:||..:||||||||:||||||||||.||.|.|
 Worm    73 IQTTSNANSSQ-----FPADIFSLQTRRRGGVIVHIGLLIYMFVALAVVCDEFFVPSLSVITEVL 132

  Fly   367 GITDDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIGTIVGSAVFNILFVIGMCALFSKTVLSL 431
            .|:|||||||||||||||||.|||:.||||:.|:||:|||||||.||||.|:..|.|||:.||.|
 Worm   133 AISDDVAGATFMAAGGSAPEFFTSLFGVFVAQDNVGVGTIVGSATFNILCVLAFCTLFSRQVLHL 197

  Fly   432 TWWPLFRDCSFYSISLLVLIYFFRDNRIFWWEALILFTIYIGYVAFMKWNVQVETCVKKMITKNK 496
            ||||||||.|||::||.:|:.||.|..|.|.|||::|::||.|..|||:|..:|...|:.:.: |
 Worm   198 TWWPLFRDMSFYTLSLFLLLIFFGDEVIEWQEALVMFSMYIAYGFFMKFNGFLELKTKQFLFR-K 261

  Fly   497 VTRVRSTDQLMPAGNAANSSETSMATQPGGSVTSRAASETRSGPPGSSNAGATGNSSGGGGTSGS 561
            |                             .:.|..|.||..    .:.||.|..|....|..|.
 Worm   262 V-----------------------------GIGSEIAPETIV----DAAAGCTPRSPHSLGAQGP 293

  Fly   562 TQT------GAKFRHGLLQLMIHTIDPLHDGKVDEKATQLHAIASLKVLLDATKPQRGG------ 614
            .::      |.:.|..:.||:|.          ||..|...:.:|.....:..||...|      
 Worm   294 RRSFPMIHGGQEVRKSIAQLVIG----------DEDDTSSSSSSSSSERSNKIKPVSNGVPEIRQ 348

  Fly   615 --------------ATTSAANHVKINLKETTLAD-------------RPNGNIDTTLDSPSLSGR 652
                          |..:..|.:|..:......|             |.|||..|.|........
 Worm   349 NGRTIMVKPANDPDAKFNNQNSIKTVITPIDFGDDHTIVINNNNNGKRKNGNNGTYLTPVEAINP 413

  Fly   653 RPSWIEQRVKIQTR----------KFSIKAPEIEDEPEPLSMAWPDTARKRLTYVLVAPLLVPMW 707
            ....:|   ..||.          ..||.:...|   :||.::||:...|:|.|:.:||:..|:.
 Worm   414 SNGHLE---LAQTNGNPVPPIALDNLSIASSTAE---KPLDLSWPEANHKKLIYLFLAPITFPLA 472

  Fly   708 LTLPDTRTPRGKRFFPVTFIGSIVWIAAFSYLMVWWANVAGDTARIPPEVMGLTFLAAGTSIPDL 772
            .||||.|.|..::||.:||||:|:||||:|||||||||..|:|..||.|:||||.||||||||||
 Worm   473 YTLPDVRKPSLRKFFAITFIGAILWIAAYSYLMVWWANTIGETFGIPTEIMGLTILAAGTSIPDL 537

  Fly   773 ITSVIVARKGFGDMAVSSSVGSNIFDVTVGLPIPWLLY---GIIYGAP---VEVNSVGMVCSITI 831
            ||||||||||.||||||||:|||:|||.||||||||::   |:....|   :.|.|.|:|||:.:
 Worm   538 ITSVIVARKGLGDMAVSSSIGSNLFDVCVGLPIPWLIHFAIGVFKSEPTQNISVTSNGLVCSLGL 602

  Fly   832 LFMMLVFVVMSIACFRWRMNKGLGFTMFLLYFAFVAVSLMFEYDVITCP 880
            ||.||:.::..:|..||:|:|..|..|...|..|..:.::.|...:.||
 Worm   603 LFAMLIVLLTCVAISRWKMDKFFGLLMIFSYCGFCMLCILLETGHLKCP 651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nckx30CNP_652011.3 Na_Ca_ex 336..480 CDD:279963 99/143 (69%)
Na_Ca_ex 721..871 CDD:279963 92/155 (59%)
ncx-5NP_505690.2 Na_Ca_ex 102..244 CDD:279963 97/141 (69%)
Na_Ca_ex 486..642 CDD:279963 92/155 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158213
Domainoid 1 1.000 199 1.000 Domainoid score I1784
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2929
OMA 1 1.010 - - QHG59101
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103716
Panther 1 1.100 - - LDO PTHR10846
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1587
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.670

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