DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nckx30C and ncx-7

DIOPT Version :9

Sequence 1:NP_652011.3 Gene:Nckx30C / 45248 FlyBaseID:FBgn0028704 Length:881 Species:Drosophila melanogaster
Sequence 2:NP_499147.3 Gene:ncx-7 / 176370 WormBaseID:WBGene00003572 Length:672 Species:Caenorhabditis elegans


Alignment Length:634 Identity:146/634 - (23%)
Similarity:250/634 - (39%) Gaps:141/634 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   333 VILHIIGVIYM---FVALAIVCDEFFVPSLDVIIEKLGITDDVAGATFMAAGGSAPELFTSVIGV 394
            |||.|:|||||   |:.::...|:||.||:..|:..|.|::.|||.||||.|..||::|.|:..|
 Worm    88 VILIIVGVIYMLVLFIMVSSAADDFFSPSISSIVAHLRISESVAGVTFMAFGNGAPDVFGSIASV 152

  Fly   395 FVS---FDDVGIGTIVGSAVFNILFVIGMCAL---FSKTVLSLTWWPLFRDCSFYSISLLVLIY- 452
            ..|   ..|:.:|.:.|..:|....|:....|   |...|.|     ..||..||.::|..|.: 
 Worm   153 LSSPTPKADLALGELFGGGLFVTTMVVSTIILTSPFDVEVFS-----TIRDLLFYLVALSFLAFC 212

  Fly   453 FFRDNRIFWWEALILFTIYIGYVAFMKWNVQVETCVKKMITKNKVTRVRSTDQLMPAGNAANSSE 517
            |...||:..|..|....:|:.||..:.....|....:|.:.|...|:.|.:.:.:    .:..|.
 Worm   213 FVFYNRVTLWMPLTFLGLYLLYVITVIGAQAVHNRKRKALQKQNSTKSRKSIKSL----RSRKSI 273

  Fly   518 TSMATQPGGSVTSRAASETRSGP-PGSSNAGATGNSSGGGGTSGSTQTGAKFRHGLLQLMIHTID 581
            .|:|..|   |........:..| |                 ..|..|||             ||
 Worm   274 HSVAPMP---VIPEIEVHDQEAPFP-----------------EISVVTGA-------------ID 305

  Fly   582 PLHDGKVDEKATQLHAIASLKVLLDATKPQRGGATTSAANHVKINLKETTLADRP------NGNI 640
            .|.:...::..|..........:::......|....:..||:.|:.:|:.|:|..      :|::
 Worm   306 KLKEHMAEKAQTTRRYTKRASFMVNGDGNLNGLHPYATHNHLGISRRESELSDEDEEFVVIHGHV 370

  Fly   641 DTTLDSPSLSGRRPSWIEQRVKIQTRKFSIKAPEIED--EPEPLSMAWPD--TARKRLTYVLVAP 701
               ........|..|.:.:.::|::.:......::.:  :|.|.:..|.:  ...|.:.|:.|.|
 Worm   371 ---FQGHEARSRAASLVPEPMQIKSWRSKDILKDLAEHLDPRPEAEDWEEMNIFSKVMAYINVVP 432

  Fly   702 LLVPMWLTLPDTRTPRGK------------------RFFPVT----------------------- 725
            .|: ..||:|.......|                  :||..|                       
 Worm   433 NLL-FKLTIPLNEMSWSKPLTLLHAFTCPAFLLFSIQFFLETPFSGSPGLWVYGLAVSIVLAILI 496

  Fly   726 ---------------------FIGSIVWIAAFSYLMVWWANVAGDTARIPPEVMGLTFLAAGTSI 769
                                 ||.||.||...|..:|....:.|..:|:..||:|||.||...||
 Worm   497 MVFTELSVQPKYYKEIYSYSGFIMSIAWIYLISSEVVNVVTMLGVVSRVSHEVLGLTILAWSNSI 561

  Fly   770 PDLITSVIVARKGFGDMAVSSSVGSNIFDVTVGLPIPWLLYGIIYGAPVEVNSVGMVCSIT---- 830
            .|||..|.|.::|:..||:::::|..:|::.:|..:|:.:      |.::...:.|..:.|    
 Worm   562 GDLIADVSVVKQGYPRMAMAAAIGGPLFNLLMGFGLPFTI------AKLQGKYISMTINPTYRLL 620

  Fly   831 ILFM--MLVFVVMSIACFRWRMNKGLGFTMFLLYFAFVAVSLMFEYDVI 877
            |||:  .|:..::.|...::|:.:.....:..:|.||:...::.|..|:
 Worm   621 ILFLAISLLATLIGIPVQKFRLQRPHAAVLISIYIAFIVFVILSETGVL 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nckx30CNP_652011.3 Na_Ca_ex 336..480 CDD:279963 52/153 (34%)
Na_Ca_ex 721..871 CDD:279963 46/199 (23%)
ncx-7NP_499147.3 PLN03151 56..671 CDD:215604 146/634 (23%)
Na_Ca_ex 96..240 CDD:279963 49/148 (33%)
Na_Ca_ex 513..663 CDD:279963 43/155 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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