DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nckx30C and Slc8b1

DIOPT Version :9

Sequence 1:NP_652011.3 Gene:Nckx30C / 45248 FlyBaseID:FBgn0028704 Length:881 Species:Drosophila melanogaster
Sequence 2:NP_573484.2 Gene:Slc8b1 / 170756 MGIID:2180781 Length:585 Species:Mus musculus


Alignment Length:612 Identity:145/612 - (23%)
Similarity:240/612 - (39%) Gaps:174/612 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 FPKDLFTKEQLENGAVILHIIGVIYMFVALAIVCDEFFVPSLDVIIEKLGITDDVAGATFMAAGG 382
            ||.:|...      |:.|::..::|:|:.|.:...:||.|:|..|...|.::.:|||.||:|.|.
Mouse    91 FPPNLLPL------AITLYVFWLLYLFLILGVTAAKFFCPNLSAISTNLKLSHNVAGVTFLAFGN 149

  Fly   383 SAPELFTSVIGVFVSFDD-----VGIGTIVGSAVFNILFVIGMCALFSKTVLSLTWWPLFRDCSF 442
            .||::|:::    |:|.|     :.||.:.|:.|.....|.|...:....:.:..  |..||.:|
Mouse   150 GAPDIFSAL----VAFSDPRTAGLAIGALFGAGVLVTTVVAGGITILHPFMAASR--PFLRDIAF 208

  Fly   443 YSISLLVLIYFFRDNRIFWWEALILFTIYIGYVAFMKWNVQVETCV---KKMITKNKVTRVRSTD 504
            |.:::.:........||....||....:|:.||      |.|..|.   ::..:::.|..:..|.
Mouse   209 YMVAVFLTFTALYLGRITLTWALGYLGLYVFYV------VTVIICTWVYQRQRSRSLVHSISETP 267

  Fly   505 QLMPAGNAANSSETSMATQPGGSVTSRAASETRSGPPGSSNAGATGNSSGGGGTSGSTQTGAKFR 569
            :|:     :.|.|..|                      |||             :.|...|.::|
Mouse   268 ELL-----SESEEDQM----------------------SSN-------------TNSYDYGDEYR 292

  Fly   570 HGLL------QLMIHTIDPLHDGKVDEKATQLHAIA--SLKVLLDATKPQRGGATTSAANHVKIN 626
            ..||      |::|..::||     |.:..:..:|:  .|||                   ||:.
Mouse   293 PLLLGRETTVQILIQALNPL-----DYRKWRTQSISWRVLKV-------------------VKLP 333

  Fly   627 LKETTLADRPNGNIDTTLDSPSLSGRRPSWIEQRVKIQTRKFSIKAPEIEDEPEPLSMAWPDTAR 691
            ::...|...|  .:|.  |....:.:||....|.|                 ..||         
Mouse   334 VEFLLLLTVP--VVDP--DKDDRNWKRPLNCLQLV-----------------ISPL--------- 368

  Fly   692 KRLTYVLVAPL------------LVPMWLTLPDTRTPRGKRFFPVTFIGS-------IVWIAAFS 737
                 |||..|            |:|:|..:...    |.....|||..:       :.|:.||.
Mouse   369 -----VLVLTLQSGVYGIYEIGGLLPVWAVVVIV----GTALASVTFFATSNREPPRLHWLFAFL 424

  Fly   738 YLM--VWWANVA-----------GDTARIPPEVMGLTFLAAGTSIPDLITSVIVARKGFGDMAVS 789
            ..:  ..|.|.|           |...|:...|:|||.||.|.||.|..:...:||:|:..||.|
Mouse   425 GFLTSALWINAAATEVVNILRSLGVIFRLSNTVLGLTLLAWGNSIGDAFSDFTLARQGYPRMAFS 489

  Fly   790 SSVGSNIFDVTVGLPIPWLLYGIIYGAPVEV--NSVGMVCSI--TILFMMLVFVVMSIACFRWRM 850
            :..|..||::.||:.:..||. ||....|||  ...|::..:  :.|.:.|:|.::|:....:::
Mouse   490 ACFGGIIFNILVGVGLGCLLQ-IIRNHVVEVKLEPDGLLVWVLASALGLSLIFSLVSVPLQCFQL 553

  Fly   851 NKGLGFTMFLLYFAFVAVSLMFEYDVI 877
            :|..|..:.|.|..|:.|.|:.|:.||
Mouse   554 SKAYGLCLLLFYICFLVVVLLTEFGVI 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nckx30CNP_652011.3 Na_Ca_ex 336..480 CDD:279963 40/148 (27%)
Na_Ca_ex 721..871 CDD:279963 50/173 (29%)
Slc8b1NP_573484.2 Na_Ca_ex 103..246 CDD:279963 42/154 (27%)
Na_Ca_ex 421..574 CDD:279963 46/153 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.