DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nckx30C and slc24a5

DIOPT Version :9

Sequence 1:NP_652011.3 Gene:Nckx30C / 45248 FlyBaseID:FBgn0028704 Length:881 Species:Drosophila melanogaster
Sequence 2:XP_002936612.2 Gene:slc24a5 / 100490024 XenbaseID:XB-GENE-853669 Length:546 Species:Xenopus tropicalis


Alignment Length:595 Identity:197/595 - (33%)
Similarity:295/595 - (49%) Gaps:149/595 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 GNQRGINDTHNDN-STTTKTPLFPKDLFTKEQLENGAVILHIIGVIYMFVALAIVCDEFFVPSLD 360
            |.||...|..|:. ...:.:..||:|.||:::.:.|.:|:|.:.::|||:|:||||:.:|:|||:
 Frog    77 GTQRIRRDVENETLCIASPSSEFPEDFFTEQERKQGGLIIHFLIILYMFLAVAIVCESYFIPSLE 141

  Fly   361 VIIEKLGITDDVAGATFMAAGGSAPELFTSVIGVFVSFDDVGIGTIVGSAVFNILFVIGMCALFS 425
            ||.|:||::.|||||||||.|.||||..|..:||||:..|:|:.|||||||:|:|.:...|.|.|
 Frog   142 VISERLGLSQDVAGATFMAIGSSAPEFVTVFLGVFVTKGDIGVSTIVGSAVYNLLGICAACCLLS 206

  Fly   426 KTVLSLTWWPLFRDCSFYSISLLVLIYFFRDNRIFWWEALILFTIYIGYVAFMKWNVQVE----- 485
            .:|..||.|||||||..|:||:..:|....||||:|:|:..|..||..|:..|.:::::.     
 Frog   207 LSVSRLTCWPLFRDCVAYAISVAAVIAITFDNRIYWYESASLILIYGIYIVTMCFDIRINQYIMR 271

  Fly   486 ------TCVKKMITKNKVTRVRSTDQLMPAGNAANSSETSMATQPGGSVTSRAASETRSGPPGSS 544
                  ||.::.:.                                                   
 Frog   272 RFSPCCTCCREAMV--------------------------------------------------- 285

  Fly   545 NAGATGNSSGGGGTSGSTQTGAKFRHGLLQLMIHTIDPLHDGKVDEKATQLHAIASLKVLLDATK 609
                           |:|:              |  :||...|.|          ||.|:...::
 Frog   286 ---------------GNTE--------------H--EPLLGWKED----------SLPVIRRHSR 309

  Fly   610 PQRGGATTSAANHVKINLKETTLADRPNGNIDTTLDSPSLSGRRPSWIEQRVKIQTRKFSIKAPE 674
            ...|           |..:|:          |.:..|.||||.:                    |
 Frog   310 SDSG-----------IFQEES----------DYSQLSISLSGLK--------------------E 333

  Fly   675 IEDEPEPLSMAWPDTARKRLTYVLVAPLLVPMWLTLPDTRTPRGKRFFPVTFIGSIVWIAAFSYL 739
            ..:.| |.....|:...||:.:||..|::..::||:||.|..|.|..|.:||:.|.|||:|.:|:
 Frog   334 SSNNP-PSVFTMPENDLKRIIWVLSLPIITLLYLTVPDCRRKRWKNLFILTFLMSAVWISAVTYI 397

  Fly   740 MVWWANVAGDTARIPPEVMGLTFLAAGTSIPDLITSVIVARKGFGDMAVSSSVGSNIFDVTVGLP 804
            :||...|.|:|..||..|||||.|||||||||.:.||:|||:|.||||:|:.||||:||: :.|.
 Frog   398 LVWMVTVVGETLSIPDTVMGLTLLAAGTSIPDTVASVLVAREGKGDMAMSNIVGSNVFDM-LCLG 461

  Fly   805 IPWLLYGIIY--GAPVEVNSVGMVCSITILFMMLVFVVMSIACFRWRMNKGLGFTMFLLYFAFVA 867
            :||.:..:..  .|||||||.|:..:...|...::|:.::|....|:::|.||....|:|..||.
 Frog   462 VPWFIKTVFVDRSAPVEVNSSGITYTTISLLFSILFIFVAIHLNGWKLDKKLGVMCLLMYLLFVT 526

  Fly   868 VSLMFEYDVI 877
            :|:::|..:|
 Frog   527 LSILYELGII 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nckx30CNP_652011.3 Na_Ca_ex 336..480 CDD:279963 76/143 (53%)
Na_Ca_ex 721..871 CDD:279963 70/151 (46%)
slc24a5XP_002936612.2 2A1904 <95..>274 CDD:273344 83/178 (47%)
2A1904 <332..536 CDD:273344 87/225 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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