DRSC/TRiP Functional Genomics Resources

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Protein Alignment VhaPPA1-1 and ATP6V0C

DIOPT Version :9

Sequence 1:NP_001247111.1 Gene:VhaPPA1-1 / 45247 FlyBaseID:FBgn0028662 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_001185498.1 Gene:ATP6V0C / 527 HGNCID:855 Length:155 Species:Homo sapiens


Alignment Length:155 Identity:50/155 - (32%)
Similarity:81/155 - (52%) Gaps:13/155 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 WACLGIGLSVSLSVVGAALGIHTTGTSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVLSG 115
            :|.:|...::..|.:|||.|...:||.|....|..|....|::|.|:....:|||||:.|::::.
Human    14 FAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLIAN 78

  Fly   116 QLEQFSMETALSQAAIQNTNWFSGYLIFGAGLAVGLVNLFCGIAVGIVGSGAALSDAANAALFVK 180
            .|.             .:.:.:..:|..||||:|||..|..|.|:||||.......|....|||.
Human    79 SLN-------------DDISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVG 130

  Fly   181 ILIVEIFGSAIGLFGLIVGIYMTSK 205
            ::::.||...:||:||||.:.:::|
Human   131 MILILIFAEVLGLYGLIVALILSTK 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaPPA1-1NP_001247111.1 ATP-synt_Vo_c_ATP6F_rpt1 51..113 CDD:349417 21/61 (34%)
ATP-synt_Vo_c_ATP6F_rpt2 138..202 CDD:349418 27/63 (43%)
ATP6V0CNP_001185498.1 V_ATP_synt_C 13..118 CDD:130170 37/116 (32%)
ATP-synt_Vo_c_ATP6C_rpt2 86..153 CDD:349416 27/66 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0636
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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