DRSC/TRiP Functional Genomics Resources

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Protein Alignment VhaPPA1-1 and ATP5MC1

DIOPT Version :9

Sequence 1:NP_001247111.1 Gene:VhaPPA1-1 / 45247 FlyBaseID:FBgn0028662 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_001002027.1 Gene:ATP5MC1 / 516 HGNCID:841 Length:136 Species:Homo sapiens


Alignment Length:68 Identity:21/68 - (30%)
Similarity:28/68 - (41%) Gaps:23/68 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 GAGLAVGLVNLFCGIAVGIVGSGAALSD---------AANAALFVKILIVEIFG----SAIGLFG 195
            |||.|          .||:.||||.:..         |.|.:|..::....|.|    .|:|||.
Human    71 GAGAA----------TVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFC 125

  Fly   196 LIV 198
            |:|
Human   126 LMV 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaPPA1-1NP_001247111.1 ATP-synt_Vo_c_ATP6F_rpt1 51..113 CDD:349417
ATP-synt_Vo_c_ATP6F_rpt2 138..202 CDD:349418 21/68 (31%)
ATP5MC1NP_001002027.1 ATP9 62..136 CDD:164765 21/68 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0636
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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