Protein Alignment VhaPPA1-1 and vha-3

DIOPT Version :9

• Sequence 1: NP_001247111.1
• Gene: VhaPPA1-1 / 45247
• FlyBaseID: FBgn0028662
• Length: 212
• Species: Drosophila melanogaster
• Sequence 2: NP_001367642.1
• Gene: vha-3 / 177018
• WormBaseID: WBGene00006912
• Length: 161
• Species: Caenorhabditis elegans
• Alignment Length: 149
• Identity: 48/149 - (32%)
• Similarity: 74/149 - (49%)
• Gaps: 10/149 - (6%)

  Fly    54 LGIGLSVSLSVVGAALGIHTTGTSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVLSGQLE 118
            :|...:...:|:|||.|...:...|...||..|.:..|::|.||....:.||||:.|:||.|::.
 Worm    20 MGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVAMVLKGKVT 84

  Fly   119 QFSMETALSQAAIQNTNWFSGYLIFGAGLAVGLVNLFCGIAVGIVGSGAALSDAANAALFVKILI 183
            ..|....|::          |:....|||..||..|..|.|:||||.......|....|||.:::
 Worm    85 SASAGYDLNK----------GFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMIL 139

  Fly   184 VEIFGSAIGLFGLIVGIYM 202
            :.||...:||:|:||.:.:
 Worm   140 ILIFSEVLGLYGMIVALIL 158

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
VhaPPA1-1	NP_001247111.1	ATP-synt_Vo_c_ATP6F_rpt1	51..113	CDD:349417	19/58 (33%)
		ATP-synt_Vo_c_ATP6F_rpt2	138..202	CDD:349418	24/63 (38%)
vha-3	NP_001367642.1	V_ATP_synt_C	16..124	CDD:130170	37/113 (33%)
		ATP-synt_Vo_c_ATP6C_rpt2	92..158	CDD:349416	25/75 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0636
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810