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Protein Alignment VhaPPA1-1 and Atp6v0c
DIOPT Version :9
Sequence 1: | NP_001247111.1 |
Gene: | VhaPPA1-1 / 45247 |
FlyBaseID: | FBgn0028662 |
Length: | 212 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_570836.1 |
Gene: | Atp6v0c / 170667 |
RGDID: | 621394 |
Length: | 155 |
Species: | Rattus norvegicus |
Alignment Length: | 163 |
Identity: | 51/163 - (31%) |
Similarity: | 82/163 - (50%) |
Gaps: | 16/163 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 46 SNP---YMWACLGIGLSVSLSVVGAALGIHTTGTSIVGGGVKAPRIKTKNLISVIFCEAVAIYGL 107
:|| ..:..:|...::..|.:|||.|...:||.|....|..|.:..|::|.|:....:|||||
Rat 6 NNPEYSSFFGVMGASSAMVFSAMGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGL 70
Fly 108 ITAIVLSGQLEQFSMETALSQAAIQNTNWFSGYLIFGAGLAVGLVNLFCGIAVGIVGSGAALSDA 172
:.|::::..| ......:..:|..||||:|||..|..|.|:||||.......|
Rat 71 VVAVLIANSL-------------TDGITLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTA 122
Fly 173 ANAALFVKILIVEIFGSAIGLFGLIVGIYMTSK 205
....|||.::::.||...:||:||||.:.:::|
Rat 123 QQPRLFVGMILILIFAEVLGLYGLIVALILSTK 155
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG0636 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.810 |
|
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