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Protein Alignment Ggamma30A and gpc-2
DIOPT Version :9
Sequence 1: | NP_001285776.1 |
Gene: | Ggamma30A / 45234 |
FlyBaseID: | FBgn0267252 |
Length: | 238 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_491935.1 |
Gene: | gpc-2 / 172396 |
WormBaseID: | WBGene00001682 |
Length: | 62 |
Species: | Caenorhabditis elegans |
Alignment Length: | 64 |
Identity: | 28/64 - (43%) |
Similarity: | 45/64 - (70%) |
Gaps: | 2/64 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 MDRDALKKQIENMKYQASMERWPLSKSIAEMRSFIEENEKNDPLINAPDKKNNPWAEKGKCVIM 72
||:..:::.:::::.|.::||.|::.|.||:|.|.|..| |||:|..|||.||||||.||.::
Worm 1 MDKSDMQRTVDSLRSQLNIERTPITVSAAELRRFTESQE--DPLVNPIDKKVNPWAEKSKCSML 62
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Ggamma30A | NP_001285776.1 |
GGL |
11..67 |
CDD:238024 |
23/55 (42%) |
gpc-2 | NP_491935.1 |
GGL |
3..62 |
CDD:128520 |
26/60 (43%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
59 |
1.000 |
Domainoid score |
I7125 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
64 |
1.000 |
Inparanoid score |
I3975 |
Isobase |
1 |
0.950 |
- |
0 |
Normalized mean entropy |
S3677 |
OMA |
1 |
1.010 |
- |
- |
|
QHG49271 |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1597581at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0006416 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto20394 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_110441 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR15936 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R4582 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X4681 |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
14 | 13.960 |
|
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