DRSC/TRiP Functional Genomics Resources

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Protein Alignment capt and CAP1

DIOPT Version :9

Sequence 1:NP_001033870.1 Gene:capt / 45233 FlyBaseID:FBgn0261458 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_001329504.1 Gene:CAP1 / 829600 AraportID:AT4G34490 Length:543 Species:Arabidopsis thaliana


Alignment Length:445 Identity:163/445 - (36%)
Similarity:241/445 - (54%) Gaps:32/445 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   357 SSNMSVAGFEDIVAGPLSQYLTLSAKIGGDVAQHAELVKSAFGSQLQYVTLATQIAQPAQPKQAE 421
            ||:.|:..:||:::..:.:.||.:.||||.|....::|..||.||.:.:....|..:|.....|.
plant   112 SSDPSILAYEDLISQCVGRALTAAEKIGGPVLDVTKIVAEAFASQKELLVRIKQTQKPDLAGLAG 176

  Fly   422 LLKPTSTQISAIQDFREKHRSSPFFNHLSAISESIPALGWV------CVEKTPGPYVKEMNDAGQ 480
            .|||.:..........|..||. |||||.|..:|:.||.|:      |....|..:|:|.....:
plant   177 FLKPLNDVTMKANAMTEGKRSD-FFNHLKAACDSLSALAWIAFTGKDCGMSMPIAHVEESWQMAE 240

  Fly   481 FYTNRVLKEWKEKDVTHVEWARAWVQT-LTELQAYIRQYHTTGLVWSGKG---AAPAGGAPPPPP 541
            ||.|:||.|::.||..|||||:|..:. |..|:.|::.::..|.||:..|   :|||.|    ||
plant   241 FYNNKVLVEYRNKDADHVEWAKALKELYLPGLREYVKSHYPLGPVWNASGKPASAPAKG----PP 301

  Fly   542 PGGLPPPPPMLDLSALKLDSAGDDR---SALFAQINQGADITKGLKKVTGDMQTHKNPSLRTGPA 603
            ....|||.|:....:.|..|:.:.:   ||:|.|::.|| :|.||:|||.||:| ||.:.|:|  
plant   302 GAPAPPPAPLFSAESSKPSSSSNQKQGMSAVFQQLSSGA-VTSGLRKVTDDMKT-KNRADRSG-- 362

  Fly   604 PFKSPAQSGGSK--AVAAPSAAQAKAPVFE-RDGKKWIIEYQKNNTGLLVENAEMNNVVYVFKCE 665
                 |.|...|  ..:.|:.::...|..| :.|:||.:|.|.....|::...:....||::.|:
plant   363 -----AVSAVEKETRTSKPAFSKTGPPKMELQMGRKWAVENQIGKKDLVISECDSKQSVYIYGCK 422

  Fly   666 GSTLTVKGKVNNIVFDSCKKCSLLFDSVVASVEFVNCQSVQMQVLGSVPTVSIDKTDGCQMYLSK 730
            .|.|.::||||||..|.|.|..::|..|||:.|.|||.:|::|..||.||||:|.|.|||:||:|
plant   423 DSVLQIQGKVNNITIDKCTKVGVVFTDVVAAFEIVNCNNVEVQCQGSAPTVSVDNTTGCQLYLNK 487

  Fly   731 DSLGVEIVNSKSSEMNILLP--DDSGDYTELALPEQYKTTIAGKTLKTVCVDSLG 783
            |||...|..:||||:|:::|  ...||:.|.|||:||.........:|..|...|
plant   488 DSLETAITTAKSSEINVMVPGATPDGDWVEHALPQQYNHVFTEGKFETTPVSHSG 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
captNP_001033870.1 CAP_N 299..604 CDD:279545 92/259 (36%)
CAP_C 633..781 CDD:285769 64/149 (43%)
CARP 664..701 CDD:197827 17/36 (47%)
CARP 702..739 CDD:197827 21/36 (58%)
CAP1NP_001329504.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 141 1.000 Domainoid score I1519
eggNOG 1 0.900 - - E1_KOG2675
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H74572
Inparanoid 1 1.050 264 1.000 Inparanoid score I951
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1098760at2759
OrthoFinder 1 1.000 - - FOG0001959
OrthoInspector 1 1.000 - - oto3623
orthoMCL 1 0.900 - - OOG6_101374
Panther 1 1.100 - - LDO PTHR10652
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1462
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.830

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