DRSC/TRiP Functional Genomics Resources

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Protein Alignment capt and cap1

DIOPT Version :10

Sequence 1:NP_001033870.1 Gene:capt / 45233 FlyBaseID:FBgn0261458 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_001001239.1 Gene:cap1 / 407920 XenbaseID:XB-GENE-5929502 Length:475 Species:Xenopus tropicalis


Alignment Length:495 Identity:226/495 - (45%)
Similarity:306/495 - (61%) Gaps:45/495 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   308 LVDRLERTLTAPQPIELPTPTLPPPPAEEEEALPVFEKAETPPPPPSPPSSNMSVAGFEDIVAGP 372
            ||||||:.:.                  :.|.|......:.     |...:.:.|..::||:.|.
 Frog     7 LVDRLEKAVA------------------KLEILAAGSGGDV-----SSADTAVYVQAYDDIINGQ 48

  Fly   373 LSQYLTLSAKIGGDVAQHAELVKSAFGSQLQYVTLATQIAQPAQPKQAELLKPTSTQISAIQDFR 437
            :::::..|.:|||||.:.|::..|....|...:.:|:|..|||:...:.:|.|.|.:|.|:||||
 Frog    49 VAEFMKKSKEIGGDVEKQADMFMSGIQLQRAILVMASQYQQPAEKDLSAILAPLSGKIQAVQDFR 113

  Fly   438 EKHRSSPFFNHLSAISESIPALGWVCVEKTPGPYVKEMNDAGQFYTNRVLKEWKEKDVTHVEWAR 502
            ||:|.|..||||||:|||:||||||.|...||||||||.||..|||||||||:|:.|..|.:|.|
 Frog   114 EKNRGSKLFNHLSALSESVPALGWVAVAPKPGPYVKEMMDAATFYTNRVLKEYKDVDKKHADWVR 178

  Fly   503 AWVQTLTELQAYIRQYHTTGLVW-----SGKGAAPAGGA-------PPPPPPGGLPPPPPMLDLS 555
            |::....:||.||:::|||||.|     ...|.||...|       ||||||||.|||||....|
 Frog   179 AYLNIWNDLQTYIKEHHTTGLNWKKTGPKASGVAPTPAAPPAPKAGPPPPPPGGPPPPPPPAPAS 243

  Fly   556 ALKLDSAGDDRSALFAQINQGADITKGLKKVTGDMQTHKNPSLRT-------GPAPFKSPAQSGG 613
            |...||.  .||.||||:|||..||||||.|:.||:|||||||:|       ||.||.||..:|.
 Frog   244 APDDDSV--SRSQLFAQLNQGEKITKGLKHVSDDMKTHKNPSLKTQGGPVRAGPKPFTSPKPTGF 306

  Fly   614 SKAVAAPSAAQAKAPVFERDGKKWIIEYQKNNTGLLVENAEMNNVVYVFKCEGSTLTVKGKVNNI 678
            . |.||....:.:.||.|.:||||.:|.|:|.:.|.:.:.|:..|||:|||..|||.||||:|:|
 Frog   307 G-APAAKPVVKKQPPVLELEGKKWKVENQENVSNLEIADTELKQVVYIFKCVNSTLQVKGKINSI 370

  Fly   679 VFDSCKKCSLLFDSVVASVEFVNCQSVQMQVLGSVPTVSIDKTDGCQMYLSKDSLGVEIVNSKSS 743
            :.|:|||..|:|:..|..||.:|.:.|::||:|.|||:||:|||||.:|||:.||..||:::|||
 Frog   371 IVDNCKKLGLVFEDAVGIVEIINSKDVKVQVMGKVPTISINKTDGCHVYLSQGSLQCEIISAKSS 435

  Fly   744 EMNILLPDDSGDYTELALPEQYKTTIAGKTLKTVCVDSLG 783
            |||||:|...|:::|..:|||:||...|:.|:|...:..|
 Frog   436 EMNILVPTSGGEFSEFPVPEQFKTVWNGQKLETTVTEIAG 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
captNP_001033870.1 PHA03269 6..>117 CDD:165527
CAP_N 299..380 CDD:460113 13/71 (18%)
CAP_C 628..780 CDD:462532 77/151 (51%)
cap1NP_001001239.1 CAP_C 319..473 CDD:462532 77/153 (50%)
Blue background indicates that the domain is not in the aligned region.

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