DRSC/TRiP Functional Genomics Resources

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Protein Alignment capt and cap2

DIOPT Version :10

Sequence 1:NP_001033870.1 Gene:capt / 45233 FlyBaseID:FBgn0261458 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_957130.2 Gene:cap2 / 393809 ZFINID:ZDB-GENE-040426-1758 Length:468 Species:Danio rerio


Alignment Length:479 Identity:231/479 - (48%)
Similarity:318/479 - (66%) Gaps:25/479 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   305 LETLVDRLERTLTAPQPIELPTPTLPPPPAEEEEALPVFEKAETPPPPPSPPSSNMSVAGFEDIV 369
            :|.||.||||.:...:.:.:...:.|......:.: .|....|           :.|:..|:.::
Zfish     1 MEALVGRLERAVVRLEAVAVKLQSCPGGLINGDIS-AVINGGE-----------SQSMEAFDRLL 53

  Fly   370 AGPLSQYLTLSAKIGGDVAQHAELVKSAFGSQLQYVTLATQIAQPAQPKQAELLKPTSTQISAIQ 434
            :|.:|:|:..||.||||||:|||:|.:|...|...:.:|....:||:.:.|:||:|.|.||.|:|
Zfish    54 SGSVSEYVQSSAAIGGDVAKHAEMVNNALQVQRTLLKMAMTHQEPAKTELADLLRPLSDQIQAVQ 118

  Fly   435 DFREKHRSSPFFNHLSAISESIPALGWVCVEKTPGPYVKEMNDAGQFYTNRVLKEWKEKDVTHVE 499
            :||||:|.|..||||||:||||||||||.|.:.|||||||||||..||||||||::|:.|..|||
Zfish   119 NFREKNRGSSLFNHLSAVSESIPALGWVAVCQKPGPYVKEMNDAAMFYTNRVLKDFKDTDARHVE 183

  Fly   500 WARAWVQTLTELQAYIRQYHTTGLVWSGKG-AAPAG--GAP--PPPPPGGLPPPPPMLDLSALKL 559
            |.|:::...|:||.:||::|.|||:||..| .||..  .||  |||||   ||||.|:|..:...
Zfish   184 WVRSYLSIWTDLQTFIREHHCTGLIWSKTGPKAPPSLLSAPLLPPPPP---PPPPMMIDSCSSPA 245

  Fly   560 DSAGDDRSALFAQINQGADITKGLKKVTGDMQTHKNPSLR--TGPAPFKSPAQSGGSKAVAAPSA 622
            |::....:|||||:|||.:||||||.|..:.:|||||:||  :|.....||:::..|   ::.:.
Zfish   246 DASSVQHAALFAQLNQGEEITKGLKHVCDEQKTHKNPNLRSQSGKTHHDSPSKTQSS---SSSNP 307

  Fly   623 AQAKAPVFERDGKKWIIEYQKNNTGLLVENAEMNNVVYVFKCEGSTLTVKGKVNNIVFDSCKKCS 687
            |:...||.|.:||||.:|||.....||:|:.|:..|||||.|.||||.||||||:|:.|:|||..
Zfish   308 ARKHPPVLELEGKKWRVEYQDQCAELLIEDTELRQVVYVFSCSGSTLQVKGKVNSIIVDNCKKLG 372

  Fly   688 LLFDSVVASVEFVNCQSVQMQVLGSVPTVSIDKTDGCQMYLSKDSLGVEIVNSKSSEMNILLPDD 752
            |:||:||..||.:|.:.:|:||:|.|||:||:||:||.:|||||||..|||::||||||||:|:.
Zfish   373 LVFDNVVGIVEIINSRDIQLQVMGKVPTISINKTEGCHVYLSKDSLDCEIVSAKSSEMNILVPEG 437

  Fly   753 SGDYTELALPEQYKTTIAGKTLKT 776
            ..||.|..:|||:||...|.:|.|
Zfish   438 EDDYREFPVPEQFKTVWDGSSLVT 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
captNP_001033870.1 PHA03269 6..>117 CDD:165527
CAP_N 299..380 CDD:460113 15/74 (20%)
CAP_C 628..780 CDD:462532 86/149 (58%)
cap2NP_957130.2 CAP_N 2..64 CDD:460113 15/73 (21%)
CAP_C 312..466 CDD:462532 86/150 (57%)
Blue background indicates that the domain is not in the aligned region.

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