DRSC/TRiP Functional Genomics Resources

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Protein Alignment capt and cas-2

DIOPT Version :10

Sequence 1:NP_001033870.1 Gene:capt / 45233 FlyBaseID:FBgn0261458 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_491324.1 Gene:cas-2 / 266829 WormBaseID:WBGene00015975 Length:457 Species:Caenorhabditis elegans


Alignment Length:494 Identity:189/494 - (38%)
Similarity:266/494 - (53%) Gaps:61/494 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 SICERLETLVDRLERTLTAPQPIELPTPTLPPPPAEEEEALPVFEKAETPPPPPSPPSSNMSVAG 364
            |:..|||.:.:|.|..|.....                      .|.|| |...:|...|:    
 Worm     4 SVVSRLENVANRTENILLKYDS----------------------NKKET-PVDATPQIINL---- 41

  Fly   365 FEDIVAGPLSQYLTLSAKIGGDVAQHAELVKSAFGSQLQYVTLATQIAQPAQPKQAELLKPTSTQ 429
            ::|.:...|..:..||||||||:.:...:.:|.|.:...::.:|....:....:.|.|:...|.:
 Worm    42 YDDAICENLVSFYDLSAKIGGDLNRLGCMTRSLFFTHRYFLWIACGRKKADNDEFATLVNDLSKE 106

  Fly   430 ISAIQDFREKHRSSPFFNHLSAISESIPALGWVCVEKTPGPYVKEMNDAGQFYTNRVLKEWKEKD 494
            |.|..||:||:|.|.|:||:..:..::...|||...|||.|::|:..|...||.||:|.|.|.|:
 Worm   107 IVAFSDFKEKNRKSEFYNHICGLEAAVGGFGWVAEPKTPAPFIKDAIDTSVFYLNRILMEHKGKN 171

  Fly   495 VTHVEWARAWVQTLTELQAYIRQYHTTGLVW-SGKGAAP-----AGGAPPPPPPGGLPPPPPMLD 553
            ..|.|||::..:.:..|..|:||:||||||| |..||.|     :||||.|||    |||||:..
 Worm   172 DFHSEWAKSIKELMLSLHEYVRQHHTTGLVWNSDPGATPMCNRKSGGAPTPPP----PPPPPISL 232

  Fly   554 LSALKLDSAGDDRSALFAQINQGADITKGLKKVTGDMQTHKNPSLRTGPAPFKSPAQSGG--SKA 616
            ::..|....|    ||...:|.|...|..|||||.:|||||||.||          :..|  ::.
 Worm   233 IAPSKPSGVG----ALLESLNTGLSATSRLKKVTPEMQTHKNPVLR----------EVNGQMNRK 283

  Fly   617 VAAPSAAQAKAP--VFER----DGKKWIIEYQKNNTGLLVENAEMNNVVYVFKCEGSTLTVKGKV 675
            ......::.|.|  :.|.    |||.|.:::|..|...:||..:....:|::||..|.:.:|||.
 Worm   284 TEERKVSENKKPEKIHESSIFWDGKIWKVDHQVGNKNAVVEVTDKKESIYIYKCNDSIIKIKGKA 348

  Fly   676 NNIVFDSCKKCSLLFDSVVASVEFVNCQSVQMQVLGSVPTVSIDKTDGCQMYLSKDSLGVEIVNS 740
            |.|..|.|:|.|::||.:||..|.:||||:|:|.||.:|||||.|||||.:|||:|:|..:||.|
 Worm   349 NAITLDGCRKTSVVFDGLVAQCEIINCQSIQIQTLGELPTVSIQKTDGCHIYLSRDALNAQIVAS 413

  Fly   741 KSSEMNI--LLPDDSGDYTELALPEQYKTTIAGKTLKTV 777
            |||||||  :|.|...:|||:|||||:.|.|.||.|.||
 Worm   414 KSSEMNISAMLEDGDDEYTEMALPEQFMTKIVGKKLVTV 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
captNP_001033870.1 PHA03269 6..>117 CDD:165527
CAP_N 299..380 CDD:460113 15/79 (19%)
CAP_C 628..780 CDD:462532 78/158 (49%)
cas-2NP_491324.1 CAP_C 305..456 CDD:462532 76/148 (51%)
Blue background indicates that the domain is not in the aligned region.

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