DRSC/TRiP Functional Genomics Resources

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Protein Alignment capt and Cap1

DIOPT Version :10

Sequence 1:NP_001033870.1 Gene:capt / 45233 FlyBaseID:FBgn0261458 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_031624.2 Gene:Cap1 / 12331 MGIID:88262 Length:474 Species:Mus musculus


Alignment Length:510 Identity:232/510 - (45%)
Similarity:316/510 - (61%) Gaps:63/510 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 LESICERLETLVDRLERTLTAPQPIELPTPTLPPPPAEEEEALPVFEKAETPPPPPSPPSSNMSV 362
            ::::.||||..|.||| .::....:.......|     .:.|:|.                   |
Mouse     4 MQNLVERLERAVGRLE-AVSHTSDMHCGYGDSP-----SKGAVPY-------------------V 43

  Fly   363 AGFEDIVAGPLSQYLTLSAKIGGDVAQHAELVKSAFGSQLQYVTLAT--QIAQPAQPKQAELLKP 425
            ..|:.::|.|:::||.:|.:|||||.:|||:|.:  |.:|:...|||  |..|||..|.::||.|
Mouse    44 QAFDSLLANPVAEYLKMSKEIGGDVQKHAEMVHT--GLKLERALLATASQCQQPAGNKLSDLLAP 106

  Fly   426 TSTQISAIQDFREKHRSSPFFNHLSAISESIPALGWVCVEKTPGPYVKEMNDAGQFYTNRVLKEW 490
            .|.||..:..||||:|.|.|||||||:||||.|||||.:...|||:|||||||..|||||||||:
Mouse   107 ISEQIQEVITFREKNRGSKFFNHLSAVSESIQALGWVALAAKPGPFVKEMNDAAMFYTNRVLKEY 171

  Fly   491 KEKDVTHVEWARAWVQTLTELQAYIRQYHTTGLVWSGKG----------AAPA-GGAPPPPPPGG 544
            ::.|..||:|.||::...|||||||:::|||||.||..|          :.|: |..||||||| 
Mouse   172 RDVDKKHVDWVRAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELSGLPSGPSVGSGPPPPPPG- 235

  Fly   545 LPPPPPMLDLSALKLDSAGDD---RSALFAQINQGADITKGLKKVTGDMQTHKNPSL-------R 599
             |||||      :...|..||   |||||||||||..||..||.|:.||:|||||:|       |
Mouse   236 -PPPPP------ISTSSGSDDSASRSALFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVR 293

  Fly   600 TGPAPFKSPAQSGGSKAVAAPSAAQAKAP-VFERDGKKWIIEYQKNNTGLLVENAEMNNVVYVFK 663
            :||.||.:|.    .:...:|..|..|.| :.|.:||||.:|.|:|.:.|::::.|:..|.|::|
Mouse   294 SGPKPFSAPK----PQTSPSPKPATKKEPALLELEGKKWRVENQENVSNLVIDDTELKQVAYIYK 354

  Fly   664 CEGSTLTVKGKVNNIVFDSCKKCSLLFDSVVASVEFVNCQSVQMQVLGSVPTVSIDKTDGCQMYL 728
            |..:||.:|||:|:|..|:|||..|:||.||..||.:|.:.|::||:|.|||:||:|||||..||
Mouse   355 CVNTTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHAYL 419

  Fly   729 SKDSLGVEIVNSKSSEMNILLPDDSGDYTELALPEQYKTTIAGKTLKTVCVDSLG 783
            ||:||..|||::||||||:|:|.:.||:.|..:|||:||...|:.|.|...:..|
Mouse   420 SKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKTLWNGQKLVTTVTEIAG 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
captNP_001033870.1 PHA03269 6..>117 CDD:165527
CAP_N 299..380 CDD:460113 17/80 (21%)
CAP_C 628..780 CDD:462532 76/152 (50%)
Cap1NP_031624.2 CAP_N 5..61 CDD:460113 17/80 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 215..253 17/45 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 277..316 15/42 (36%)
CAP_C 317..472 CDD:462532 76/154 (49%)
Blue background indicates that the domain is not in the aligned region.

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