DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment COX1 and COX1

DIOPT Version :10

Sequence 1:YP_003024028.1 Gene:COX1 / 4512 HGNCID:7419 Length:513 Species:Homo sapiens
Sequence 2:NP_904330.1 Gene:COX1 / 17708 MGIID:102504 Length:514 Species:Mus musculus


Alignment Length:512 Identity:466/512 - (91%)
Similarity:493/512 - (96%) Gaps:0/512 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVM 65
            ||.:|||||||||||||||||||||||::|||||:||||||||||.|||:|.|||||||||||||
Mouse     1 MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVM 65

Human    66 IFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYP 130
            |||||||:|||||||||||||||||||||||||||||||||||.||||||:||||||||||||||
Mouse    66 IFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYP 130

Human   131 PLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLL 195
            |||||.:|.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   131 PLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLL 195

Human   196 LLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTY 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||:|||
Mouse   196 LLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTY 260

Human   261 YSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLA 325
            ||||||||||||||||||||||||||||||||||||:||||||||||||||||||||||||||||
Mouse   261 YSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLA 325

Human   326 TLHGSNMKWSAAVLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIM 390
            ||||.|:|||.|:||||||||||||||||||||:|||||||||||||||||||||||||||||||
Mouse   326 TLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIM 390

Human   391 GGFIHWFPLFSGYTLDQTYAKIHFTIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSS 455
            .||:||||||||:|||.|:||.||.|||:|||:||||||||||||||||||||||||||||.:||
Mouse   391 AGFVHWFPLFSGFTLDDTWAKAHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSS 455

Human   456 VGSFISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMK 512
            :|||||||||::|||||||||||||:|:.|...|.|||||:||||||||||||.|:|
Mouse   456 MGSFISLTAVLIMIFMIWEAFASKREVMSVSYASTNLEWLHGCPPPYHTFEEPTYVK 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX1YP_003024028.1 COX1 5..507 CDD:177210 459/501 (92%)
COX1NP_904330.1 COX1 4..507 CDD:177210 459/502 (91%)

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