DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment COX1 and COX1

DIOPT Version :10

Sequence 1:YP_003024028.1 Gene:COX1 / 4512 HGNCID:7419 Length:513 Species:Homo sapiens
Sequence 2:NP_059333.1 Gene:COX1 / 140539 ZFINID:ZDB-GENE-011205-14 Length:516 Species:Danio rerio


Alignment Length:512 Identity:437/512 - (85%)
Similarity:475/512 - (92%) Gaps:0/512 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVM 65
            |...||.|||||||||||||:||||||::||||||||||||.|||.|||:|.|||||||||||||
Zfish     1 MTITRWFFSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVM 65

Human    66 IFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYP 130
            ||||||||:||||||||||||||||||||||||||||||||||.||||||:.|||||||||||||
Zfish    66 IFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYP 130

Human   131 PLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLL 195
            |||||.:|.||||||||||||||||||||||||||||.||||||.::|||||||||:||:|||||
Zfish   131 PLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAVLVTAVLL 195

Human   196 LLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTY 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||:|.|
Zfish   196 LLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVAY 260

Human   261 YSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLA 325
            |:||||||||||||||||:||.|||||||||||||||||||||||||||||||||||||||||||
Zfish   261 YAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLA 325

Human   326 TLHGSNMKWSAAVLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIM 390
            ||||..:||...:||||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish   326 TLHGGAIKWETPMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIM 390

Human   391 GGFIHWFPLFSGYTLDQTYAKIHFTIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSS 455
            .||:||||||:||||:..:.||||.:|||||||||||||||||:|||||||||||||..||.:||
Zfish   391 AGFVHWFPLFTGYTLNSVWTKIHFGVMFIGVNLTFFPQHFLGLAGMPRRYSDYPDAYALWNTVSS 455

Human   456 VGSFISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMK 512
            :||.|||.||::.:|::||||.:||:||.||..:.|:|||:||||||||||||.:::
Zfish   456 IGSLISLVAVIMFLFILWEAFTAKREVLSVELTATNVEWLHGCPPPYHTFEEPAFVQ 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX1YP_003024028.1 COX1 5..507 CDD:177210 433/501 (86%)
COX1NP_059333.1 COX1 1..515 CDD:177177 437/512 (85%)

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