DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nsun2 and rsmF

DIOPT Version :10

Sequence 1:NP_652007.1 Gene:Nsun2 / 45064 FlyBaseID:FBgn0026079 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_416349.2 Gene:rsmF / 946348 ECOCYCID:G7008 Length:479 Species:Escherichia coli


Alignment Length:380 Identity:104/380 - (27%)
Similarity:151/380 - (39%) Gaps:82/380 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 FLASIRDNLPTTFRVTGFKDEAKALLSIIETQLFTEYVR-AVAE-LHQKAPED-VERPLCLPWYP 122
            ||..:|:.:|:|.   .|.|...|....:...:....:: :||: |...||.. ...|  :||..
E. coli    12 FLTQMREAMPSTL---SFDDFLAACQRPLRRSIRVNTLKISVADFLQLTAPYGWTLTP--IPWCE 71

  Fly   123 NGLAYQLHLTRKDIRRSEPLYRLHNFLIVETTAGGISRQEAVSMIPPIVL--DVRPTDKVLDMCA 185
            .|...:     :|...:.||..     ..|..:|....|||.||:|...|  |.....:|:|:.|
E. coli    72 EGFWIE-----RDNEDALPLGS-----TAEHLSGLFYIQEASSMLPVAALFADGNAPQRVMDVAA 126

  Fly   186 APGSKTAQLIEALHAAPEEHKIPPGFVLANDVDNNRCYMLVHQAKRLNSPCLLVTNHDSSVFPNL 250
            ||||||.|:...::        ..|.:|||:...:|..:|.....|.....:.:|:.|..||   
E. coli   127 APGSKTTQISARMN--------NEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVF--- 180

  Fly   251 VTTKPDGSKAILKFDKILCDVPCSGDGTLRKNPDIWLKWNLAQAYNLHGIQYRIVRRGAEMLEVG 315
                  |:.....||.||.|.||||:|.:||:||....|:......:...|..::......|..|
E. coli   181 ------GAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPG 239

  Fly   316 GRLVYSTCSLNPIENEAVLQRIIKDADGALELVDAGHLVPGLKYKPGMTDWKLATKEVDQIFTRF 380
            |.||||||:||..|||||...:.:....|:|.:..|.|.||            |.|.:.:     
E. coli   240 GTLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLGDLFPG------------ANKALTE----- 287

  Fly   381 EEVPESLHTIIRPGMFPLPADEMAKIGLEKCLRVLPHLQDSGGFFVAVLEKRRQL 435
                                        |..|.|.|.:.|..|||||.|.|.:.:
E. coli   288 ----------------------------EGFLHVFPQIYDCEGFFVARLRKTQAI 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nsun2NP_652007.1 RsmB <55..433 CDD:439914 104/376 (28%)
rsmFNP_416349.2 yebU 6..474 CDD:183387 104/380 (27%)

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