DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nsun2 and CG11109

DIOPT Version :10

Sequence 1:NP_652007.1 Gene:Nsun2 / 45064 FlyBaseID:FBgn0026079 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_730761.1 Gene:CG11109 / 40507 FlyBaseID:FBgn0037200 Length:439 Species:Drosophila melanogaster


Alignment Length:336 Identity:87/336 - (25%)
Similarity:127/336 - (37%) Gaps:118/336 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 YRLHNFLIVETTAGGIS--RQEAVSMIPPI--------------------VLDVRPTDKVLDMCA 185
            |:|.|  ..|..|.|::  .|..||.:|.:                    |||.:|.:::|||||
  Fly   174 YQLFN--NAEKPASGVAVEMQSNVSGVPTLGDLSSEDGLLQNLPSIVCVRVLDPQPGERILDMCA 236

  Fly   186 APGSKTAQLIEALHAAPEEHKIPPGFVLANDVDNNRCYMLVHQAKRLNSPCLLVTNHDSSVFPNL 250
            |||:||:.:.|.:.        ..|.|:|.|...:|...::.:.....|    :|.|   ||.:.
  Fly   237 APGNKTSHIAELMG--------DRGSVVALDNSASRVRSMLPKLGHYKS----ITAH---VFNST 286

  Fly   251 VTTKPDGSKAIL-----------KFDKILCDVPCSGDGTLRKNPDIWLKWNLAQAYNLHG---IQ 301
            .....|...|.:           .||:||.|.||||   |...|.  |..::.|...|..   ||
  Fly   287 EAVAADAPSAPVGEFTGPPFPCESFDRILLDAPCSG---LGNRPQ--LSCSIKQVKVLSSYPHIQ 346

  Fly   302 YRIVRRGAEMLEVGGRLVYSTCSLNPIENEAV----LQRIIKDADGALELVDAGHLVPGLKYKPG 362
            .|:..:..:::..||.||||||::...|.|.:    |::.::     |.|.||.....|      
  Fly   347 RRLFEQAVQLVRPGGILVYSTCTVTEDECECLVAWALRKFVE-----LRLTDATPRWGG------ 400

  Fly   363 MTDWKLATKEVDQIFTRFEEVPESLHTIIRPGMFPLPADEMAKIGLEKC-LRVLPHLQDSG---- 422
                                          ||: |||       |.|.| .|:|.....||    
  Fly   401 ------------------------------PGL-PLP-------GFEACKSRLLQRFGPSGANAD 427

  Fly   423 --GFFVAVLEK 431
              |||:|..:|
  Fly   428 TVGFFIAKFQK 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nsun2NP_652007.1 RsmB <55..433 CDD:439914 87/336 (26%)
CG11109NP_730761.1 PUA_NSun6-like 102..195 CDD:409292 7/22 (32%)
RsmB <207..439 CDD:439914 77/301 (26%)

Return to query results.
Submit another query.