DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nsun2 and Nop2

DIOPT Version :9

Sequence 1:NP_652007.1 Gene:Nsun2 / 45064 FlyBaseID:FBgn0026079 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_001178714.1 Gene:Nop2 / 314969 RGDID:1304616 Length:772 Species:Rattus norvegicus


Alignment Length:484 Identity:120/484 - (24%)
Similarity:186/484 - (38%) Gaps:124/484 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KRENGPKRTDRQAQPYEEIKRDNAFFIKY--YQLQKICATD--EEWTQFLASIRDNLPTTFRVTG 77
            :||.|..||:..:|    :::|.|.:..|  :.|.|:....  .|..:||.:.....|.|.|...
  Rat   236 QREEGRSRTEYLSQ----LQKDLATYYSYGDFLLSKLMELFPLSELIEFLEANEVPRPITLRTNT 296

  Fly    78 FK----DEAKALLSIIETQLFTEYVRAVAELHQKAPEDVERPLCLPWYPNGL-AYQLHLTRKDIR 137
            .|    |.|:||::           |.|         ::: ||. .|..:|| .|.         
  Rat   297 LKTRRRDLAQALIN-----------RGV---------NLD-PLG-KWSKSGLVVYD--------- 330

  Fly   138 RSEPLYRLHNFLIVETTAGGISRQEAVSMIPPIVLDVRPTDKVLDMCAAPGSKTAQLIEALHAAP 202
            .|.|:.....:|     ||....|.|.||:|.:.|..:..:::||||.|||.||:.:.:.:... 
  Rat   331 SSVPIGATPEYL-----AGHYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYIAQLMKNT- 389

  Fly   203 EEHKIPPGFVLANDVDNNRCYMLVHQAKRLNSPCLLVTNHDSSVFPNLVTTKPDGSKAILKFDKI 267
                   |.:||||.:..|...:|....||.....:|:::|...||          |.:..||::
  Rat   390 -------GVILANDANAERLKSVVGNLHRLGVTNTIVSHYDGRQFP----------KVVGGFDRV 437

  Fly   268 LCDVPCSGDGTLRKNPDIWLKWNLAQAYNLHGIQYRIVRRGAEML----EVGGRLVYSTCSLNPI 328
            |.|.||||.|.:.|:|.:....:.........:|..::....:.:    :.||.|||.|||:...
  Rat   438 LLDAPCSGTGVISKDPAVKTNKDEKDIQRCAHLQKELLLSAIDSVNAASKTGGYLVYCTCSITVE 502

  Fly   329 ENEAVLQRIIKDADGALELVDAGHLVP-GLKYKPGMTDWKLATKEVDQIFTRFEEVPESLHTIIR 392
            |||.|:...:|..:        ..||| ||.:.             .:.||||.|  ...|..:|
  Rat   503 ENEWVVDYALKKRN--------VRLVPTGLDFG-------------QEGFTRFRE--RRFHPTLR 544

  Fly   393 PGMFPLPADEMAKIGLEKCLRVLPHLQDSGGFFVAVLEKRRQLSFEKNDVVELVKLNETAKQPAA 457
                             ...|..||..:..|||:|..:|      ..|.:.:....|..|..| .
  Rat   545 -----------------ATRRFYPHTHNMDGFFIAKFKK------FSNSIPQPHSGNSAAGTP-T 585

  Fly   458 EPQVDADGKPIEEKSVPWGPQRKKRRLHG 486
            ||.:.....|..|.|     .:..::.||
  Rat   586 EPDLKGQVTPKSENS-----SQPTKKAHG 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nsun2NP_652007.1 RsmB 13..433 CDD:223222 109/429 (25%)
Nop2NP_001178714.1 Methyltr_RsmF_N <279..353 CDD:293730 25/109 (23%)
nop2p 292..566 CDD:188051 92/367 (25%)
Nol1_Nop2_Fmu 357..565 CDD:279522 68/265 (26%)
PRK10905 573..>761 CDD:236792 10/43 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0144
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.