DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nsun2 and nsun-1

DIOPT Version :9

Sequence 1:NP_652007.1 Gene:Nsun2 / 45064 FlyBaseID:FBgn0026079 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_493742.1 Gene:nsun-1 / 173437 WormBaseID:WBGene00021073 Length:664 Species:Caenorhabditis elegans


Alignment Length:558 Identity:137/558 - (24%)
Similarity:223/558 - (39%) Gaps:166/558 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 DRQAQPYEEIKRDNAFFIKYYQLQKICATDEEWTQFLASIRD----NLPTTFRVTGFKDEAKAL- 85
            |..|..:..|::.:|...|  |.:||.|..||..|.  :|.:    .|||   |...::|.|:: 
 Worm    97 DSDAGDHLPIEKKSAALDK--QKEKIIAEGEEELQL--NIANQATFELPT---VEEIENEMKSVP 154

  Fly    86 -LSIIETQLFTEYVRAVAELH-----QKAPED----VERPLC-------------LPWYPNGL-- 125
             |.|:: |...:.::.:.:..     ||:.|:    :::.||             :..:|||.  
 Worm   155 NLEIVK-QRIADVIQVLGDFKNRRDPQKSRENYVEVLKKDLCSQYGYNDYLMGKFMDLFPNGAEL 218

  Fly   126 ----------------AYQLHLTRKDIRRSEPLYRLHNF----------LIV-----------ET 153
                            |..|.:.|:|:.:: .:.|..|.          |:|           |.
 Worm   219 LEFLEANDNPRPVTIRANSLKVKRRDLAKN-LINRGMNVDPAADWTKVGLVVYDSQVPVGATPEY 282

  Fly   154 TAGGISRQEAVSMIPPIVLDVRPTDKVLDMCAAPGSKTAQLIEALHAAPEEHKIPPGFVLANDVD 218
            .||....|...|::|.:.|..:|.|:|||||:|||.||:.:...:..:        |.:.|||.:
 Worm   283 LAGHYMIQGLNSLLPVMALAPQPGDRVLDMCSAPGGKTSHIAALMKNS--------GVLFANDAN 339

  Fly   219 NNRCYMLVHQAKRLNSPCLLVTNHDSSVFPNLVTTKPDGSKAILKFDKILCDVPCSGDGTLRKNP 283
            ..||..::....||.....:|.|.....|..:   :|:|      ||:||.|.||||.|.:.|:.
 Worm   340 FTRCRAIIGNLHRLGVNNTVVCNLGGEEFSKI---RPNG------FDRILLDAPCSGTGVIWKDQ 395

  Fly   284 DIWLKWNLAQAYNLHGIQYRIVRRGAEMLEV----GGRLVYSTCSLNPIENEAVLQRIIKDADGA 344
            .:....:.......|.:|.:::....:.|:.    ||.|||||||:...|||||:..:::...  
 Worm   396 SVKTSKDSQDVQRRHTMQRQLILSALDSLDANSPNGGYLVYSTCSVLVEENEAVVNFLLERRH-- 458

  Fly   345 LELVDAGHLVPGLKYKPGMTDWKLATKEVDQIFTRFEEVPESLHTIIRPGMFPLPADEMAKIGLE 409
            .|||..|..:                 .||. :|||.:.  ..|          |:..|.|    
 Worm   459 CELVPTGLSI-----------------GVDG-YTRFRDY--RFH----------PSLSMTK---- 489

  Fly   410 KCLRVLPHLQDSGGFFVAVLEKRRQLSFEKNDVVELVKLNETAKQPA------AEPQ-------- 460
               |..||:.:..||:||.::|.......|..|:|  |..|.|.|.:      ||.:        
 Worm   490 ---RYYPHVHNIDGFYVAKIKKLSNAKMSKQGVME--KEKEKAAQKSQNKKNKAEAEASESSDDE 549

  Fly   461 ------VDADG--KPIEEKSVPWGPQRKKRRLHGYKED 490
                  |:.:|  ||.:::      |:||::..|...|
 Worm   550 EEKKNGVEVNGQKKPAKKQ------QQKKQKADGDDSD 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nsun2NP_652007.1 RsmB 13..433 CDD:223222 119/477 (25%)
nsun-1NP_493742.1 RsmB 153..508 CDD:223222 99/412 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0144
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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