DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nsun2 and nsun-4

DIOPT Version :9

Sequence 1:NP_652007.1 Gene:Nsun2 / 45064 FlyBaseID:FBgn0026079 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_490958.1 Gene:nsun-4 / 171790 WormBaseID:WBGene00021476 Length:465 Species:Caenorhabditis elegans


Alignment Length:403 Identity:94/403 - (23%)
Similarity:166/403 - (41%) Gaps:92/403 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KRENGPKRTDRQAQPY-------------EEIKRDNAFFIKYYQLQKICATDEEWTQFLASI--- 65
            ||::..::.:|:.|..             |:.:.|.|.|.....|.:..|:..|.:.....:   
 Worm   111 KRKSVEEKANRETQKVKHEISNPSTSTNTEDSEPDEAIFRSAAGLGEFRASAGELSSGSLQMGLG 175

  Fly    66 RDNLPTTFRVTGFKDEAKALLSIIETQLFTEYVRAVAELHQKAPEDVERPLCLPWYPNGLAYQLH 130
            :.|......:|||:.|.   :.|.:...|..|.:|   ||.::   .:|.:.|. :|..:..::.
 Worm   176 QSNQNKNVEITGFEGEG---VRIPKRDHFFYYPQA---LHVRS---FDRAVLLD-FPAPMKDEVG 230

  Fly   131 LTRKDIRRSEPLYRLHNFLIVETTAGGISRQEAVSMIPPIVLDVRPTDKVLDMCAAPGSKTAQLI 195
            :         |.|.|.:        ||       |::|.:.|.::..|.:||||||||.|:  |:
 Worm   231 V---------PSYWLLD--------GG-------SLLPVLALGLQKDDSLLDMCAAPGGKS--LL 269

  Fly   196 EALHAAPEEHKIPPGFVLANDVDNNRCYMLVHQAKRLNSPCLLVTNHDSSVFPNLVTTKPDGSKA 260
            .||...|.:       ::.||....|    :.|.||   ..:.....||......|..:.|.|..
 Worm   270 AALSNLPSK-------IVCNDFKLAR----LGQLKR---ALMTYVPEDSETIDKFVLKRKDASDV 320

  Fly   261 -----ILKFDKILCDVPCSGDGTLRKNPD--IWLKWNLAQAYNLHGIQYRIVRRGAEMLEVGGRL 318
                 ...:||:|.|||||.|.......|  ::...:..|..:|..:|.:|:......::|||.:
 Worm   321 KTWDEFEAYDKVLVDVPCSTDRLSVSTDDGNLFSTGSTQQRLDLPVLQTKILVNALRSVKVGGSV 385

  Fly   319 VYSTCSLNPIENEAVLQR---IIKDADGALELVDAGHLVPGLKYKPGMTDWKLATKEVDQIFTRF 380
            |||||:|:|.:||||::.   ::::..|.:.:.::.|              :|.:........||
 Worm   386 VYSTCTLSPSQNEAVVENAVAVVRNDFGIVTVEESLH--------------QLVSHMTSSGLYRF 436

  Fly   381 EEVPESLHTIIRP 393
            .:.|  |..::.|
 Worm   437 HDTP--LGALVVP 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nsun2NP_652007.1 RsmB 13..433 CDD:223222 94/403 (23%)
nsun-4NP_490958.1 RsmB <234..394 CDD:223222 55/190 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0144
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.