DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn43Aa and Serpine3

DIOPT Version :9

Sequence 1:NP_524805.1 Gene:Spn43Aa / 45041 FlyBaseID:FBgn0024294 Length:390 Species:Drosophila melanogaster
Sequence 2:XP_006252257.2 Gene:Serpine3 / 691375 RGDID:1585042 Length:413 Species:Rattus norvegicus


Alignment Length:403 Identity:89/403 - (22%)
Similarity:177/403 - (43%) Gaps:51/403 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GVWISAPEGLGNTIKDRNLFATELFQTLATDRQDENVIISPVSIQLALGLAYYGAEGRTAAELQK 75
            |:|:...|           ||..|:|:.|.:....|.:|||.|:.|:|.:..:.|.|.|..:|.:
  Rat    27 GLWLLKTE-----------FALHLYQSAAAETNGTNFVISPASVSLSLEILQFAARGNTGWQLAE 80

  Fly    76 TLHASAKESKDGLAESYHNL---LHSYIKSKTV-LEIANKVYTRQNLTVSSHFREVAQKYFDSEV 136
            .|..:.::.:  :.|..|.:   ||:  .|:.: :|:|..::.:...::|..|.|...::.:|.:
  Rat    81 ALGYTVQDPR--VREFLHTVYITLHN--SSQGIGMELACTLFMQTGTSLSPCFVEQVSRWANSSL 141

  Fly   137 EPLDFSRETEAVEQINRWVKQQTENKIERVVESLEP-----------DTNVALVNAIYFKARWAR 190
            |..|||.......:.::...:.:..:        .|           .|.:::|:.:.|::.|.:
  Rat   142 ELADFSEPNTTTMEASKGTTRPSTGE--------GPGSPLWGRAGALSTQLSIVSTMTFQSSWQQ 198

  Fly   191 PFNDEDTRDREFWLSESRSIQVPTMFADNWYYYADYPEL---DAKAIELFFENINLTMWFILPNQ 252
            .|:....:...|..:....:|||.|.......|..:.:.   ....:||.:.....::..:||..
  Rat   199 RFSSVALQPLPFTCAHGLVLQVPAMHQVAEVSYGQFQDAAGHKVDVLELLYLGRVASLLLVLPQD 263

  Fly   253 R-SGLQALEQKLKGVDFNLLEDRWQWQSVSVYLPKFKFEFDTDLRPTLHKMGISAMFSD-AADFS 315
            : :.|..:|..|.....:|...|.:...:.|:||:|:.:...||:..|...||:.:|.. .|:..
  Rat   264 KGTPLDHIEPHLTARVIHLWTTRLKRARMDVFLPRFRIQNQFDLKSILRSWGITDLFDPLKANLK 328

  Fly   316 NIFQDSPIGTRITKVQHKTFIDVNEIGCEAAGASYAAGVPMSLPLDPKTFVADHPFAFIIRDKH- 379
            .|  ....|..:::|.||..::::|.|.::..|:  |.:.:.....| .|.||.||.|::|:.: 
  Rat   329 GI--SGRDGFYVSEVTHKAKMELSEEGTKSCAAT--AVLLLRRSRTP-AFKADRPFIFLLREHNT 388

  Fly   380 -AVYFT-GHIVKF 390
             ||..| |.:..|
  Rat   389 VAVRITHGKVANF 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AaNP_524805.1 SERPIN 28..387 CDD:238101 85/381 (22%)
Serpine3XP_006252257.2 serpin 20..400 CDD:422956 88/400 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.110

Return to query results.
Submit another query.