DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn43Aa and serpina3m

DIOPT Version :9

Sequence 1:NP_524805.1 Gene:Spn43Aa / 45041 FlyBaseID:FBgn0024294 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_001025693.1 Gene:serpina3m / 595085 XenbaseID:XB-GENE-6453454 Length:413 Species:Xenopus tropicalis


Alignment Length:401 Identity:115/401 - (28%)
Similarity:186/401 - (46%) Gaps:55/401 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 EGLGNTIKDRNL-FATELFQTLAT------DRQDENVIISPVSIQLALGLAYYGAEGRTAAELQK 75
            |.|...:...|: ||..:::.:|:      :.:.:|:..|||||..:|.:...||:..|..::..
 Frog    33 EELKEILAQLNMHFAVNIYKQVASSALKEKNSEPKNIFFSPVSISTSLAMLALGAKAETRHQILN 97

  Fly    76 TLHASAKES---KDGLAESYHNLLHSYIKSKTVLEI--ANKVYTRQNLTVSSHFREVAQKYFDSE 135
            :|  :.||:   :..:..::.:||.:..|.|..|:|  .|..:..:.|.....|...|::|:.::
 Frog    98 SL--APKETPIQEVKIHNAFKHLLQTLNKPKKDLKITVGNAAFVEEELKFLKSFAHEAERYYQAD 160

  Fly   136 VEPLDFSRETEAVEQINRWVKQQTENKIERVVESLEPDTNVALVNAIYFKARWARPFNDEDTRDR 200
            |...:|....:|..|||.:|..||..||:.:|.....||.:.|||.|.||..|..||:.:.||..
 Frog   161 VFSTNFKNPKDAEIQINNYVNNQTNGKIKELVRGPSMDTKLLLVNYILFKGEWESPFSPDFTRLS 225

  Fly   201 EFWLSESRSIQVPTM--------FADNWYYYADYPELDAKAIELFFENINLTMWFILPNQRSGLQ 257
            .|.:.....::|..|        |.||        ||....::|.:.: :..|..|:|..     
 Frog   226 VFSIDNRTKVEVKMMSRMGRFDIFLDN--------ELPCTVLKLPYID-DALMLLIMPEL----- 276

  Fly   258 ALEQKLKGVDFNLLED---RWQWQSVS-----VYLPKFKFEFDTDLRPTLHKMGISAMFSDAADF 314
               .|::.|:..|.:|   ||: .|.|     :|:|||.......|:..|..:|:|.:|||.|||
 Frog   277 ---GKIQEVEAALSKDTILRWR-NSTSKKFLRLYMPKFSISSSLKLKEILSDVGMSNIFSDQADF 337

  Fly   315 SNIFQDSPIGTRITKVQHKTFIDVNEIGCEAAGASYAAGVPMSLPLDPKTFVADHPFAFIIRDKH 379
            |.|.:|..:  .::||.||..:||:|.|.|||..:....:..||....|   .|.||..:|..|.
 Frog   338 SGIVEDGKL--TLSKVIHKAVLDVDEKGTEAAAVTAVNVIRYSLLKSQK---VDRPFLVVICSKQ 397

  Fly   380 --AVYFTGHIV 388
              .:.|.|.||
 Frog   398 TDTILFMGRIV 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AaNP_524805.1 SERPIN 28..387 CDD:238101 111/388 (29%)
serpina3mNP_001025693.1 SERPIN 43..407 CDD:320777 111/388 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.