DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn43Aa and serpina3k

DIOPT Version :10

Sequence 1:NP_524805.1 Gene:Spn43Aa / 45041 FlyBaseID:FBgn0024294 Length:390 Species:Drosophila melanogaster
Sequence 2:XP_002936116.2 Gene:serpina3k / 496632 XenbaseID:XB-GENE-6453500 Length:432 Species:Xenopus tropicalis


Alignment Length:364 Identity:104/364 - (28%)
Similarity:188/364 - (51%) Gaps:12/364 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 FATELFQTLATDRQDENVIISPVSIQLALGLAYYGAEGRTAAELQKTLHASAKE-SKDGLAESYH 93
            |...|::.:|.|...||:.||||||.....:...||...|..::.:.|..:..| :::.:.:.:.
 Frog    72 FGFSLYRQIAADHPTENIFISPVSISTVFAMLSLGARSNTLNQIIEGLKFNRSELTEEEMHKGFQ 136

  Fly    94 NLLH--SYIKSKTVLEIANKVYTRQNLTVSSHFREVAQKYFDSEVEPLDFSRETEAVEQINRWVK 156
            :|||  :...||..|...|.::..::|.:...|.|.:::::::|....||....||.:|||.:.:
 Frog   137 HLLHMLNDPNSKVQLNSGNALFIDKDLQLIQKFVEDSKQFYEAETFSTDFHNTEEATKQINTYAE 201

  Fly   157 QQTENKIERVVESLEPDTNVALVNAIYFKARWARPFNDEDTRDREFWLSESRSIQVPTMFADNWY 221
            .:|:.||..::.|::..|.:.|:|.|||...|.:.|..|.|:|..|.:.|:.::.||.|..:..|
 Frog   202 NKTKGKITDLISSVDEKTILVLINYIYFYGEWEKHFEKEWTKDGIFHVDENTNVTVPMMHRNGMY 266

  Fly   222 YYADYPELDAKAIELFFENINLTMWFILPNQRSGLQALEQKLKGVDFNLLEDRWQWQSVSVYLPK 286
            ..|...:|....:::.::. |.|..||||:: ..|:.:|:.|:.......:..::.:.|.:.|||
 Frog   267 NVAFDEKLGCTVVQIPYKG-NATALFILPDE-GKLRQVEEALEKAVVKSWKKLFRKRFVHLTLPK 329

  Fly   287 FKFEFDTDLRPTLHKMGISAMFSDAADFSNIFQDSPIGTRITKVQHKTFIDVNEIGCEAAGASYA 351
            ......|||...|.|:|::.:|||.:|.|.|...:|:  :::|..||..:.::|.|.||||.:..
 Frog   330 LSISATTDLVKELSKLGVTDVFSDNSDLSGIVDVTPL--KVSKAVHKVLVSIDETGTEAAGVTVM 392

  Fly   352 AGVPMSLPLDPKTFVADHPFAFIIRDK--HAVYFTGHIV 388
            ..||..||  |: ...:.||..:|.:.  .|..|.|.::
 Frog   393 EIVPTMLP--PR-IEYNRPFVLMIYEPTLRANLFMGRVM 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AaNP_524805.1 serpin42Dd-like_insects 27..390 CDD:381070 104/364 (29%)
serpina3kXP_002936116.2 serpin 62..431 CDD:476815 104/364 (29%)

Return to query results.
Submit another query.