DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn43Aa and Spn27A

DIOPT Version :9

Sequence 1:NP_524805.1 Gene:Spn43Aa / 45041 FlyBaseID:FBgn0024294 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_001260143.1 Gene:Spn27A / 45815 FlyBaseID:FBgn0028990 Length:447 Species:Drosophila melanogaster


Alignment Length:451 Identity:117/451 - (25%)
Similarity:203/451 - (45%) Gaps:86/451 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LSIILLGVWISA--------------PEGLGNTIKDR---------------------------- 27
            |:::||.:::||              |:|:..|..|:                            
  Fly     8 LAVMLLSLFLSALATGNGNSIPTTTTPQGVFETRTDKLPGGAASVPSGAGIYDDIDTFVPFRSDS 72

  Fly    28 -NLFATELFQT-LATDRQDENVIISPVSIQLALGL--AYYGAEGRTAAELQKTLHASAKESKDGL 88
             :.|:..|.:| |..:..|:||||||.|::|.|.|  ...||..:|..||..|  .:...|::.:
  Fly    73 HDPFSWHLLKTVLQNETADKNVIISPFSVKLVLALLAEAAGAGTQTQVELANT--QTDIRSQNNV 135

  Fly    89 AESYHNLLHSYIKSKTV---LEIANKVYTRQNLTVSSHFREVAQKYFDSEVEPLDFSRETEAVEQ 150
            .|.|...|:|:.|...:   |.:..|::|...:.....|....:.::|||||.|||:....|.:.
  Fly   136 REFYRKTLNSFKKENQLHETLSVRTKLFTDSFIETQQKFTATLKHFYDSEVEALDFTNPEAAADA 200

  Fly   151 INRWVKQQTENKIERVVESLEPDTNV-----ALVNAIYFKARWARPFNDEDTRDREFWLSESRSI 210
            ||.|....|:.:::::|   .|| ||     .|.|.|||...|.|.|  ..|....|:.|:....
  Fly   201 INAWAANITQGRLQQLV---APD-NVRSSVMLLTNLIYFNGLWRRQF--ATTFQGSFFRSKDDQS 259

  Fly   211 QVPTMFADNWYYYADYPELDAKAIELFFENINLTMWFILPNQRSGLQALEQKLKGVDFNLLEDRW 275
            :...|...:::||....:|.|:.:.|.::..| :::.:||...:|:..|.:.|:..:  |...:|
  Fly   260 RAEFMEQTDYFYYTTSEKLKAQILRLPYKGKN-SLFVLLPYALNGIHDLVKNLENDE--LKSAQW 321

  Fly   276 QWQ--SVSVYLPKFKFEFDTDLRPTLHKMGISAMFSDAADFSNIFQDSPIG--TRITKVQHKTFI 336
            ..:  .|.|.||||.|::..:|:.||..:|:..:|.|:|....:.:.:.:.  .:::.:..|..|
  Fly   322 AMEEVKVKVTLPKFHFDYQQNLKETLRSLGVREIFEDSASLPGLTRGADVAGKVKVSNILQKAGI 386

  Fly   337 DVNEIGCEAAGASYAAGVPMSLPLDPK--------TFVADHPFAFIIRDKHA--VYFTGHI 387
            :|||.|.||    |||.|   :.::.|        .|..:.||.|.|.::..  :.|.|.:
  Fly   387 NVNEKGTEA----YAATV---VEIENKFGGSTAIEEFNVNRPFVFFIEEESTGNILFAGKV 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AaNP_524805.1 SERPIN 28..387 CDD:238101 108/383 (28%)
Spn27ANP_001260143.1 SERPIN 72..440 CDD:238101 108/385 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.