DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Aa and Serpinb1b

DIOPT Version :10

Sequence 1:NP_524805.1 Gene:Spn43Aa / 45041 FlyBaseID:FBgn0024294 Length:390 Species:Drosophila melanogaster
Sequence 2:XP_038952280.1 Gene:Serpinb1b / 306891 RGDID:1560658 Length:380 Species:Rattus norvegicus


Alignment Length:368 Identity:122/368 - (33%)
Similarity:190/368 - (51%) Gaps:31/368 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 NLFATELFQTLATDRQDENVIISPVSIQLALGLAYYGAEGRTA---AELQKTLHASAKESKDGLA 89
            :|||.|||.||:......| |.||.||..||.:.:.||:|.:|   ..|.:|.|..:.|......
  Rat     9 SLFALELFHTLSESSPTGN-IFSPFSISSALAMVFLGAKGSSAPSSLRLAETFHFDSVEDIHSRF 72

  Fly    90 ESYHNLLHSYIKSKTVLEIANKVYTRQNLTVSSHFREVAQKYFDSEVEPLDFSRETE-AVEQINR 153
            :|.:..:..:..|.| |::||::|..:.......|....||.:.:::.|:||...:| |.::||:
  Rat    73 QSLNAEMRKHGASHT-LKVANRLYGEKTYNFLPEFLASTQKMYGADLAPVDFQHASEDARKEINK 136

  Fly   154 WVKQQTENKIERVVES--LEPDTNVALVNAIYFKARWARPFNDEDTRDREFWLSESRSIQVPTMF 216
            |||.|||.||..::..  :...|.:.||||||||..|...|....|.|..|.|::..:..|..|:
  Rat   137 WVKGQTEGKIPELLAGGVVNSTTKLVLVNAIYFKGIWQEKFLTRHTTDAPFRLNKKDTKMVKMMY 201

  Fly   217 ADNWYYYADYPELDAKAIELFFENINLTMWFILP----NQRSGLQALEQKLKGVDFNLLEDRWQW 277
            ....:.:...|:|..|.:|:.::...|:|..:||    ::.:|||.:|::|      .||..::|
  Rat   202 QKEKFPFGYIPDLKCKVLEMPYQGGELSMVILLPEDIEDESTGLQKIEEQL------TLEKLYEW 260

  Fly   278 Q--------SVSVYLPKFKFEFDTDLRPTLHKMGISAMFSDA-ADFSNIFQDSPIGTRITKVQHK 333
            .        .|.|.|||||.|....|...|.::|:..:||.: ||.|.:.:...|  .|:|:.||
  Rat   261 TKHENLKEIDVHVNLPKFKIEESYILNSNLGRLGLQDLFSSSKADLSGMSESRDI--FISKIVHK 323

  Fly   334 TFIDVNEIGCEAAGASYAAGVPMSLPLDPKTFVADHPFAFIIR 376
            :|::|||.|.|||.|:  ||:.....:..:.|:.||||.|.||
  Rat   324 SFVEVNEEGTEAAAAT--AGLVEYCLVSIEAFIVDHPFLFFIR 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AaNP_524805.1 serpin42Dd-like_insects 27..390 CDD:381070 122/368 (33%)
Serpinb1bXP_038952280.1 serpinB1_LEI 1..380 CDD:381028 122/368 (33%)

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