DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Aa and Serpinc1

DIOPT Version :10

Sequence 1:NP_524805.1 Gene:Spn43Aa / 45041 FlyBaseID:FBgn0024294 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_001012027.1 Gene:Serpinc1 / 304917 RGDID:1307404 Length:465 Species:Rattus norvegicus


Alignment Length:400 Identity:109/400 - (27%)
Similarity:191/400 - (47%) Gaps:43/400 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PEGLGNTI----KDRNLFATELFQTLATDRQD-ENVIISPVSIQLALGLAYYGAEGRTAAELQKT 76
            ||.....:    |..:.|||..:|.||..:.| :|:.:||:||..|..:...||...|..:|.:.
  Rat    74 PEATNRRVWELSKANSRFATNFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNNTLKQLMEV 138

  Fly    77 LHASAKESKDGLAESYHNLLHSYI------------KSKTVLEIANKVYTRQNLTVSSHFREVAQ 129
            .      ..|.::|...:.:|.:.            ||..::. ||:::..::||.:..:::|::
  Rat   139 F------KFDTISEKTSDQIHFFFAKLNCRLYRKANKSSNLVS-ANRLFGDKSLTFNESYQDVSE 196

  Fly   130 KYFDSEVEPLDFSRETEAVE-QINRWVKQQTENKIERVVE--SLEPDTNVALVNAIYFKARWARP 191
            ..:.::::||||....|... .||.||..:||.:|:.|:.  :::..|.:.|||.||||..|...
  Rat   197 IVYGAKLQPLDFKENPEQSRVTINNWVANKTEGRIKDVIPQGAIDELTALVLVNTIYFKGLWKSK 261

  Fly   192 FNDEDTRDREFWLSESRSIQVPTMFADNWYYYADYPELDAKAIELFFENINLTMWFILPNQRSGL 256
            |:.|:||...|...:.:|..||.|:.:..:.|....| ..:.:|:.|:..::||..|||.....|
  Rat   262 FSPENTRKEPFHKVDGQSCLVPMMYQEGKFKYRRVGE-GTQVLEMPFKGDDITMVLILPKPEKSL 325

  Fly   257 QALEQKLKGVDFNLLEDRWQWQS------VSVYLPKFKFEFDTDLRPTLHKMGISAMFS-DAADF 314
            ..:||:|..   .||:   :|..      :.|::|:|:.|....|:..|..||:..:|| :.:..
  Rat   326 AKVEQELTP---ELLQ---EWLDELSEVMLVVHVPRFRIEDSFSLKEQLQDMGLVDLFSPEKSQL 384

  Fly   315 SNIFQDSPIGTRITKVQHKTFIDVNEIGCEAAGASYAAGVPMSLPLDPKTFVADHPFAFIIRD-- 377
            ..|..:......::...||.|::|||.|.|||.::.......||.....||.|:.||..:||:  
  Rat   385 PGIIAEGRDDLFVSDAFHKAFLEVNEEGSEAAASTSVVITGRSLNPSRVTFKANRPFLVLIREVA 449

  Fly   378 KHAVYFTGHI 387
            .:.:.|.|.:
  Rat   450 LNTIIFMGRV 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AaNP_524805.1 serpin42Dd-like_insects 27..390 CDD:381070 106/385 (28%)
Serpinc1NP_001012027.1 serpinC1_AT3 71..464 CDD:381002 109/399 (27%)

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